Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL356379.1-201ENST00000414105 126 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 NDUFB4P7-201ENST00000423198 363 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AL512844.2-201ENST00000433990 593 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC234064.1-201ENST00000436312 247 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AL049734.2-201ENST00000441066 616 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 NEFMP1-201ENST00000443423 1006 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 ANKRD26P4-201ENST00000455755 950 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 RNA5SP135-201ENST00000517019 125 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC036111.3-201ENST00000526389 112 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 MIR5571-201ENST00000577998 113 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 DUXAP11-201ENST00000603858 526 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC080188.3-201ENST00000624842 748 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 CCT4P2-201ENST00000233836 1548 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TOPBP1Q92547 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 RNU1-62P-201ENST00000362599 164 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 Y_RNA.258-201ENST00000364613 105 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TOPBP1Q92547 RNU11-5P-201ENST00000391216 129 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AL133264.1-201ENST00000407157 562 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 RNU6-920P-201ENST00000410926 92 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 RNU6-1328P-201ENST00000410938 106 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 MRPS17P3-201ENST00000465453 385 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC022447.3-201ENST00000506865 495 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 RNU6-885P-201ENST00000516607 104 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC025594.3-201ENST00000613068 790 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 AC005832.2-201ENST00000538921 1430 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 MIR17-201ENST00000385012 84 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 SEPT2P1-201ENST00000419651 180 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AL590383.1-201ENST00000428602 75 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 CBX3P6-201ENST00000430257 527 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.6□□□□□ -2.15
TOPBP1Q92547 Z80107.1-201ENST00000436830 412 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 ARF4P4-201ENST00000439608 520 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AL353718.1-201ENST00000451028 517 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 GTF2IP12-201ENST00000456547 356 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AC107626.1-201ENST00000471084 183 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.6□□□□□ -2.15
TOPBP1Q92547 SNORA31.22-201ENST00000517204 135 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 DEFB108E-201ENST00000524692 240 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TOPBP1Q92547 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.6□□□□□ -2.15
TOPBP1Q92547 CBX3P8-201ENST00000532412 525 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 CBX3P7-201ENST00000532876 502 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 LARP7P2-201ENST00000575306 125 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 HMGN2P15-201ENST00000585707 270 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AL671309.1-201ENST00000603750 544 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 AL109933.3-201ENST00000619095 188 ntBASIC1.6□□□□□ -2.15
TOPBP1Q92547 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 SFR1P2-201ENST00000421841 730 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 ZFAND6P1-201ENST00000434138 605 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 MTND2P24-201ENST00000453434 806 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC138853.1-201ENST00000503549 823 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC093510.2-201ENST00000562820 896 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 AL022067.1-201ENST00000602426 454 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC007742.2-201ENST00000618226 398 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 AC068057.2-201ENST00000624047 895 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.59□□□□□ -2.16
TOPBP1Q92547 DBF4P1-201ENST00000412976 1892 ntBASIC1.59□□□□□ -2.16
TOPBP1Q92547 ZNF849P-201ENST00000594711 1566 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.58□□□□□ -2.16
TOPBP1Q92547 RNU6-650P-201ENST00000365658 111 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 RNU2-28P-201ENST00000410457 189 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC008850.1-201ENST00000427546 362 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.58□□□□□ -2.16
TOPBP1Q92547 OSTCP8-201ENST00000445117 448 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.58□□□□□ -2.16
TOPBP1Q92547 SUMO2P2-201ENST00000456482 255 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AP1S2P1-201ENST00000457344 379 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC097493.1-201ENST00000463958 372 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TOPBP1Q92547 RPL21P47-201ENST00000483696 477 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 RNU6-1256P-201ENST00000516539 103 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms