Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TPT1P14-201ENST00000448018 505 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 ZNF886P-201ENST00000450781 723 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 FABP5P15-201ENST00000453566 214 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 USP9YP10-201ENST00000454868 628 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 SNORA4.4-201ENST00000515921 135 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNU6-467P-201ENST00000517027 110 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNA5SP165-201ENST00000517142 115 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AL121821.2-201ENST00000556081 394 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 ROCK1P1-201ENST00000573767 549 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AL161798.1-201ENST00000604630 131 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNU6-1192P-201ENST00000612197 107 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNU6-489P-201ENST00000618289 107 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNU6-748P-201ENST00000384648 107 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 RNU6-298P-201ENST00000390888 96 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 MTATP6P30-201ENST00000443540 664 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 RPL38P4-201ENST00000502376 214 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 YWHAEP4-201ENST00000505390 198 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 RN7SKP258-201ENST00000517151 304 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC233702.2-202ENST00000562547 291 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC021171.1-201ENST00000603137 706 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC104763.2-201ENST00000604179 382 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC009974.1-201ENST00000608881 455 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 MIR6715A-201ENST00000615929 79 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AL136981.2-201ENST00000617319 734 ntBASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.8□□□□□ -2.12
CLHC1Q8NHS4 RNU1-72P-201ENST00000362976 153 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 RNU6-253P-201ENST00000384730 105 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 MIR1284-201ENST00000408337 120 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 MIR1302-8-201ENST00000408342 128 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC097463.2-201ENST00000421074 142 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AL121890.1-201ENST00000435457 205 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 MTCO1P53-201ENST00000441633 699 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AL161788.1-201ENST00000441805 169 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 MEMO1P3-201ENST00000459811 302 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC117503.1-201ENST00000472241 394 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC010631.1-201ENST00000474150 156 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 UBL5P3-201ENST00000475112 231 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 RPL36AP48-201ENST00000485521 314 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC096571.1-202ENST00000506634 735 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 SUMO2P5-201ENST00000506790 245 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 DUXAP1-201ENST00000556632 463 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC090079.2-201ENST00000575289 768 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 BNIP3P23-201ENST00000599655 511 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC098826.3-201ENST00000603823 466 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AF129408.1-201ENST00000608767 431 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AL109620.1-201ENST00000618738 1197 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AP000676.3-201ENST00000623299 569 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AP003476.1-201ENST00000623984 516 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 AC104454.1-201ENST00000421341 1401 ntBASIC1.79□□□□□ -2.12
CLHC1Q8NHS4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 MIR561-201ENST00000385216 97 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 HMGB3P12-201ENST00000438745 556 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AC018437.1-201ENST00000492214 406 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 HSBP1P1-201ENST00000555205 166 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AL133153.1-201ENST00000557756 303 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 MIR4648-201ENST00000580107 72 ntBASIC1.78□□□□□ -2.12
CLHC1Q8NHS4 AC090897.2-201ENST00000581715 130 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms