Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 U3.19-201ENST00000390893 196 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 RNU6-817P-201ENST00000391083 104 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AL512633.1-201ENST00000399931 655 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 CALM2P3-201ENST00000400429 449 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 RNU6-1025P-201ENST00000410629 104 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 MORF4L1P6-201ENST00000418771 268 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AL353729.1-201ENST00000425044 720 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC007560.1-201ENST00000426912 237 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC091390.1-201ENST00000433904 331 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AL118520.1-201ENST00000450770 291 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC233279.1-201ENST00000455300 423 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 TPTE2P5-203ENST00000458118 728 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 RPS27P26-201ENST00000494583 239 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC109927.2-201ENST00000506416 303 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 MTCO3P9-201ENST00000506989 781 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 Y_RNA.704-201ENST00000516851 102 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 OR4R1P-201ENST00000529879 463 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 HPRT1P3-201ENST00000539521 576 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 MIR5680-201ENST00000577577 84 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 MTATP6P3-201ENST00000581686 676 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 MIR3605-201ENST00000583214 100 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC068790.2-201ENST00000602601 557 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC109347.2-201ENST00000610220 349 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC011939.3-201ENST00000613686 466 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 AP003122.5-201ENST00000527668 3766 ntBASIC2.41□□□□□ -2.02
BEST4Q8NFU0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST4Q8NFU0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
BEST4Q8NFU0 MTND5P29-201ENST00000458676 1807 ntBASIC2.4□□□□□ -2.02
BEST4Q8NFU0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RNU6-778P-201ENST00000363269 103 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 SNORD56.5-201ENST00000364281 72 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RNU1-109P-201ENST00000383960 147 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RNU6-1042P-201ENST00000384204 107 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 MIR578-201ENST00000384828 96 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RN7SKP220-201ENST00000410611 288 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 MTATP6P18-201ENST00000417994 673 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AL109913.1-201ENST00000421173 514 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AL158156.1-201ENST00000422509 473 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AL160275.3-201ENST00000423876 471 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AL159987.2-201ENST00000432754 307 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RPL21P133-201ENST00000443666 476 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC003982.1-202ENST00000469928 248 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC068587.1-201ENST00000483613 781 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 FAM92A1P2-202ENST00000504766 877 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC091133.4-201ENST00000511142 308 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RNU6-581P-201ENST00000516214 105 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RNU6-572P-201ENST00000516724 80 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 RNU6-143P-201ENST00000516942 93 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC023632.4-201ENST00000517783 191 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 MIR4775-201ENST00000581168 75 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC005261.5-201ENST00000596280 355 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC019159.1-201ENST00000605094 187 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC107294.1-201ENST00000609524 467 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 HULC.1-201ENST00000612720 240 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AC009161.2-201ENST00000624626 138 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 U6.114-201ENST00000636407 96 ntBASIC2.4□□□□□ -2.03
BEST4Q8NFU0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BEST4Q8NFU0 MTCO1P12-201ENST00000414273 1543 ntBASIC2.39□□□□□ -2.03
BEST4Q8NFU0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BEST4Q8NFU0 RNU6-1287P-201ENST00000362914 107 ntBASIC2.39□□□□□ -2.03
BEST4Q8NFU0 RNU6-799P-201ENST00000363567 107 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms