Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RPS29P15-201ENST00000458329 171 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 RPL31P60-201ENST00000478450 367 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC097462.2-201ENST00000504623 481 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC092436.1-201ENST00000506450 503 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 RNU6-685P-201ENST00000517088 95 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC104027.1-201ENST00000521887 300 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 MTND1P35-201ENST00000526739 508 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AP002404.1-201ENST00000532005 451 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 MIR4703-201ENST00000577728 79 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AP000907.4-201ENST00000604143 237 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC013553.2-201ENST00000604244 589 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AL354950.2-201ENST00000617939 290 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 YWHAEP7-203ENST00000622054 312 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC006111.3-201ENST00000622137 383 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 MTND5P27-201ENST00000428871 1720 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC090740.1-201ENST00000623193 2262 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 Y_RNA.38-201ENST00000362617 102 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 RNU6-451P-201ENST00000362921 107 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 SNORA44-201ENST00000384584 132 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 MIR1289-1-201ENST00000408836 144 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 USP9YP6-201ENST00000413550 854 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 YPEL5P1-201ENST00000419731 367 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 RPL35AP12-201ENST00000425362 338 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 CALM1P1-201ENST00000442082 433 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 RNU6-953P-201ENST00000459154 107 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC092185.1-201ENST00000491371 97 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 RNU6-677P-201ENST00000516914 101 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 RNA5SP503-201ENST00000517047 117 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC234778.2-201ENST00000566241 354 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC068135.2-201ENST00000569293 1028 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 MIR2682-201ENST00000580305 110 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC008521.1-201ENST00000587471 187 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 AC012409.4-201ENST00000612923 249 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 SNORD39.4-201ENST00000620099 78 ntBASIC3.44□□□□□ -1.86
VPS52Q8N1B4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VPS52Q8N1B4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 MIR148B-201ENST00000362252 99 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 RNU6-7-201ENST00000364784 107 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 Y_RNA.295-201ENST00000364918 102 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 RNU6-8-201ENST00000365467 107 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 RNU6-190P-201ENST00000384154 102 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 RNU6-903P-201ENST00000391270 109 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 RNU2-29P-201ENST00000410423 189 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AC025750.2-201ENST00000442609 450 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AL118520.1-201ENST00000450770 291 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AL162395.1-201ENST00000457882 422 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AC117522.3-201ENST00000507974 584 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS52Q8N1B4 UBL5P2-201ENST00000583788 219 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AC002545.1-201ENST00000592511 181 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AC093732.2-201ENST00000607950 274 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AP003122.6-201ENST00000623831 495 ntBASIC3.43□□□□□ -1.86
VPS52Q8N1B4 AL137790.1-201ENST00000634283 177 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms