Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 Y_RNA.16-201ENST00000362421 102 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 Y_RNA.200-201ENST00000364018 102 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 RNY1-201ENST00000364228 113 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 RNU6-140P-201ENST00000384566 108 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 RNA5SP397-201ENST00000391323 118 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 RNU2-14P-201ENST00000411053 191 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX5Q8N196 RPL21P66-201ENST00000426566 466 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC009238.2-201ENST00000431026 355 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AL445305.1-201ENST00000432577 575 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX5Q8N196 Z82188.1-201ENST00000436709 154 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC009296.1-201ENST00000443146 155 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AL162591.2-201ENST00000449634 317 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AL451050.1-201ENST00000450126 415 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 NDUFB4P10-201ENST00000452541 359 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.96□□□□□ -1.62
SIX5Q8N196 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC106785.1-201ENST00000565935 262 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX5Q8N196 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX5Q8N196 MIR4659A-201ENST00000580269 81 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 AC022726.1-201ENST00000587475 207 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 FTX_2.1-201ENST00000618816 94 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 SCARNA4-201ENST00000629045 128 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX5Q8N196 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SIX5Q8N196 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SIX5Q8N196 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX5Q8N196 AP000542.2-201ENST00000623199 6179 ntBASIC4.96□□□□□ -1.62
SIX5Q8N196 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX5Q8N196 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX5Q8N196 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX5Q8N196 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX5Q8N196 AC010300.1-201ENST00000600671 5134 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 SNORD113-8-201ENST00000363497 74 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 Y_RNA.274-201ENST00000364714 101 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 RNU6-843P-201ENST00000384454 104 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 RNU2-20P-201ENST00000410425 191 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX5Q8N196 AC104332.1-201ENST00000440471 797 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX5Q8N196 RPS26P21-201ENST00000475397 348 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX5Q8N196 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX5Q8N196 RNU6-1012P-201ENST00000516606 109 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 AC023824.2-201ENST00000566185 400 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 AC023043.4-201ENST00000612081 449 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 AC004792.1-201ENST00000614523 137 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 AC097372.5-201ENST00000623665 376 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 AC112200.1-201ENST00000625015 234 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX5Q8N196 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 OR56B2P-202ENST00000641377 2453 ntBASIC4.95□□□□□ -1.62
SIX5Q8N196 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX5Q8N196 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SIX5Q8N196 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX5Q8N196 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX5Q8N196 AC118273.1-201ENST00000525324 3006 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX5Q8N196 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX5Q8N196 MARK2P15-201ENST00000432204 2186 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AC104623.2-202ENST00000623477 4002 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SIX5Q8N196 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SIX5Q8N196 RNU6-222P-201ENST00000362438 107 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 RNU6-1301P-201ENST00000362724 104 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 Y_RNA.150-201ENST00000363562 102 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 RNA5SP28-201ENST00000363841 119 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 Y_RNA.269-201ENST00000364685 89 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 RNU6-937P-201ENST00000384325 106 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 RNU6-658P-201ENST00000384606 106 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 Y_RNA.541-201ENST00000384640 113 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 MIR325-201ENST00000385260 98 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AL033519.2-201ENST00000403958 392 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 TMSB10P2-201ENST00000416049 131 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX5Q8N196 EIF1AXP1-201ENST00000419267 435 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX5Q8N196 UBE2CP3-201ENST00000502715 450 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 SNORA43.2-201ENST00000516652 128 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 RNU6-789P-201ENST00000517105 102 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX5Q8N196 MRPS36P4-201ENST00000534436 298 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AC011476.5-201ENST00000615594 130 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AC091903.1-201ENST00000624322 454 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 AC241585.2-209ENST00000638217 143 ntBASIC4.94□□□□□ -1.62
SIX5Q8N196 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX5Q8N196 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX5Q8N196 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SIX5Q8N196 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX5Q8N196 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
SIX5Q8N196 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SIX5Q8N196 AL133243.3-201ENST00000617415 3004 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms