Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SNORA63.3-201ENST00000362682 132 ntBASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AL161651.1-201ENST00000440882 223 ntBASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 MTND4LP3-201ENST00000468320 276 ntBASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 FAM106CP-201ENST00000582212 507 ntBASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AC104763.3-201ENST00000613765 618 ntBASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 AC004852.3-201ENST00000614131 326 ntBASIC0.29□□□□□ -2.36
VPS13BQ7Z7G8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AP000776.1-201ENST00000530032 1663 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 Y_RNA.48-201ENST00000362710 103 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 RNU6-173P-201ENST00000364215 104 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 MIR329-1-201ENST00000385028 80 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 OR52A4P-202ENST00000481634 799 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC118282.2-201ENST00000508739 374 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 RNA5SP404-201ENST00000517118 132 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 MTND2P17-201ENST00000550281 688 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 HMGB1P14-201ENST00000557424 591 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC006213.5-201ENST00000619673 288 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 MTND2P9-201ENST00000422293 931 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC005741.1-201ENST00000511094 432 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 MIR4802-201ENST00000581881 80 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC008945.2-201ENST00000606056 604 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 MTCO1P23-201ENST00000415223 1526 ntBASIC0.28□□□□□ -2.36
VPS13BQ7Z7G8 AC010329.5-201ENST00000623497 2174 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 SNRPEP3-201ENST00000338402 276 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 AC015908.1-201ENST00000478739 476 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 AP003327.1-201ENST00000529684 127 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 BNIP3P25-201ENST00000596023 559 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 AC113194.1-201ENST00000606037 500 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 AC099842.1-201ENST00000619919 596 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 FAM157B-203ENST00000639350 358 ntBASIC0.28□□□□□ -2.37
VPS13BQ7Z7G8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 RNU6-349P-201ENST00000362402 107 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 Y_RNA.67-201ENST00000362870 100 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 RPL9P9-202ENST00000466501 579 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 RPS27P22-201ENST00000478056 241 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC109927.2-201ENST00000506416 303 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 MIR5087-201ENST00000635826 76 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 HSBP1P2-201ENST00000299671 229 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 RNU6-1222P-201ENST00000384615 107 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 MIR30A-201ENST00000385092 71 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 MTCO1P56-201ENST00000401674 224 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 SFR1P2-201ENST00000421841 730 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC079140.2-201ENST00000506193 142 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 RNU4-57P-201ENST00000515980 135 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 RNU6-758P-201ENST00000516292 89 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 SCARNA11.3-201ENST00000517276 130 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 MIR3126-201ENST00000577443 74 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 PCNAP1-202ENST00000595299 752 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AL136313.1-201ENST00000624804 202 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 Y_RNA.167-201ENST00000363735 109 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC087879.1-201ENST00000474343 374 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 MTND2P26-201ENST00000528255 1029 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 AC011260.1-201ENST00000578420 472 ntBASIC0.27□□□□□ -2.37
VPS13BQ7Z7G8 MIR146A-201ENST00000385201 99 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 MIR92A1-201ENST00000385233 78 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 MRPL35P1-201ENST00000404272 572 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 EDDM3CP-201ENST00000415977 425 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC002550.2-201ENST00000621246 394 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC116563.2-201ENST00000624751 535 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC245047.4-201ENST00000433189 144 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC009296.1-201ENST00000443146 155 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AL590365.1-201ENST00000450788 243 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 SYPL1P1-201ENST00000473622 768 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC091435.1-201ENST00000505442 584 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 RNU7-193P-201ENST00000516723 65 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 MIR4299-201ENST00000577899 72 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 BX322635.1-201ENST00000605804 496 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AL356585.4-201ENST00000623078 1229 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 RNU4-67P-201ENST00000364569 141 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 MIR493-201ENST00000385254 89 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AL158823.1-201ENST00000418441 478 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 SNRPEP7-201ENST00000438350 220 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13BQ7Z7G8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms