Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-1298P-201ENST00000362456 101 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNA5SP28-201ENST00000363841 119 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.286-201ENST00000364813 102 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNU5E-7P-201ENST00000365290 117 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-1074P-201ENST00000383995 104 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.586-201ENST00000391146 98 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNA5SP397-201ENST00000391323 118 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 AL590762.2-201ENST00000395798 571 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.597-201ENST00000410463 100 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-651P-201ENST00000411040 105 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RPS26P2-201ENST00000440331 348 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 AL359073.1-201ENST00000448036 403 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RPL23AP24-201ENST00000458203 385 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RPL30P1-201ENST00000488676 339 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 AC140059.1-201ENST00000489238 361 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RN7SKP46-201ENST00000515942 234 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 CYCSP29-201ENST00000533731 318 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 FAM60BP-201ENST00000578364 658 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 MIR3138-201ENST00000585238 82 ntBASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SH3RF1Q7Z6J0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 MAPK10-304ENST00000641341 3984 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.580-201ENST00000391004 95 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AL162725.1-201ENST00000435405 301 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AC008267.6-201ENST00000441664 139 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AL589765.3-201ENST00000446084 462 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AC091167.1-201ENST00000492017 396 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AL121603.1-201ENST00000553815 142 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AC034105.4-201ENST00000568304 277 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AC067852.4-201ENST00000590314 478 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 AC090617.7-201ENST00000623952 126 ntBASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SH3RF1Q7Z6J0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SH3RF1Q7Z6J0 OR4G2P-202ENST00000641004 1759 ntBASIC5.34□□□□□ -1.56
SH3RF1Q7Z6J0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SH3RF1Q7Z6J0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SH3RF1Q7Z6J0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
SH3RF1Q7Z6J0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 ASNSP1-201ENST00000518311 1939 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 ZFRP1-201ENST00000457579 2970 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 RBBP8P1-201ENST00000449447 1844 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 UBE2WP1-201ENST00000362030 340 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 Y_RNA.272-201ENST00000364696 102 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 Y_RNA.308-201ENST00000365043 101 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 AL359837.1-201ENST00000381357 287 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 Y_RNA.435-201ENST00000384095 112 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 RNU6-658P-201ENST00000384606 106 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 SNORA46.1-201ENST00000391069 153 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 UBA52P6-201ENST00000399822 382 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 AP000907.1-201ENST00000428428 510 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 AC009296.1-201ENST00000443146 155 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 SNORD116-26-201ENST00000516006 96 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 AK6P2-201ENST00000549020 471 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 AC015912.2-201ENST00000571053 181 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 AC073349.3-201ENST00000617616 186 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 OR56B2P-202ENST00000641377 2453 ntBASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SH3RF1Q7Z6J0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 AC093535.2-201ENST00000624769 2326 ntBASIC5.32□□□□□ -1.56
SH3RF1Q7Z6J0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms