Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC009161.2-201ENST00000624626 138 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 MIR7515-201ENST00000637837 67 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC068137.4-201ENST00000638485 296 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 MTND5P17-201ENST00000418405 1603 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 ELF2P3-201ENST00000445099 1506 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 RNA5SP374-201ENST00000362939 125 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.296-201ENST00000364930 108 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 RNU6-61P-201ENST00000365528 109 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 GSTA9P-201ENST00000406231 611 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 SNORA11.1-201ENST00000408133 129 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 RNU6-387P-201ENST00000411331 105 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC092809.3-201ENST00000415453 231 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 DLGAP5P1-201ENST00000430307 464 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 DPPA3P1-201ENST00000448050 469 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 UQCRHP3-201ENST00000451503 251 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 FABP5P13-201ENST00000452144 328 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC006445.1-201ENST00000491925 405 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AIG1P1-201ENST00000503376 148 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 HMGB1P29-201ENST00000505659 499 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 MTND2P33-201ENST00000506452 1031 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC108078.1-201ENST00000508073 725 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 SNORD27.1-201ENST00000516319 72 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 DUSP12P1-201ENST00000612874 516 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC012409.4-201ENST00000612923 249 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC093648.1-201ENST00000623546 606 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 Z99571.1-201ENST00000636677 394 ntBASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.84□□□□□ -1.95
NUP54Q7Z3B4 AC103710.2-202ENST00000641454 2853 ntBASIC2.84□□□□□ -1.96
NUP54Q7Z3B4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NUP54Q7Z3B4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.84□□□□□ -1.96
NUP54Q7Z3B4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
NUP54Q7Z3B4 AC004972.1-201ENST00000623934 2209 ntBASIC2.84□□□□□ -1.96
NUP54Q7Z3B4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC092447.7-201ENST00000422212 1621 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 RNU4-75P-201ENST00000364621 146 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 RNU6-259P-201ENST00000383999 107 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 SNORD116-4-201ENST00000384733 96 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 MIR491-201ENST00000384877 84 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 MIR301A-201ENST00000385261 86 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 RNU2-49P-201ENST00000410666 184 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 MTCO3P41-201ENST00000414801 328 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 BPY2DP-201ENST00000422208 265 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC008716.1-201ENST00000511084 513 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 RNU6-914P-201ENST00000516749 109 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 MTCYBP20-201ENST00000524239 1129 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AP003122.3-201ENST00000526316 255 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC084851.1-201ENST00000529105 249 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AP002404.1-201ENST00000532005 451 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 ADI1P3-201ENST00000549509 470 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 SUB1P2-201ENST00000556401 297 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC090616.3-201ENST00000582184 217 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC004223.2-201ENST00000590309 544 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AL356280.1-201ENST00000603614 379 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AL136363.2-201ENST00000604173 851 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 Z84480.1-201ENST00000605131 311 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 AC025034.2-201ENST00000623264 286 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 MIR3199-2-201ENST00000636243 86 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 U2.21-201ENST00000637295 81 ntBASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NUP54Q7Z3B4 MTND5P26-201ENST00000426018 1752 ntBASIC2.82□□□□□ -1.96
NUP54Q7Z3B4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms