Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL121821.2-201ENST00000556081 394 ntBASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 AL158032.1-201ENST00000605401 106 ntBASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 AC130324.3-201ENST00000614165 542 ntBASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 U6.42-201ENST00000618440 107 ntBASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.65□□□□□ -1.99
NHLRC1Q6VVB1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RNU4-21P-201ENST00000362802 126 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RNU4-1-201ENST00000363925 141 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RPL21P75-201ENST00000396599 483 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RPL21P28-201ENST00000401418 483 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AL592114.1-201ENST00000403842 483 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 BX682237.1-201ENST00000415016 335 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AL139281.1-201ENST00000422120 335 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 PGBD4P3-201ENST00000440731 581 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 SNORD42A-201ENST00000459584 64 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RPL21P39-201ENST00000463605 483 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RPL21P93-201ENST00000480465 489 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RN7SL499P-201ENST00000481141 276 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC087190.1-201ENST00000484462 480 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC093591.1-201ENST00000491435 481 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC139453.3-201ENST00000493276 369 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RPL22P13-201ENST00000493291 347 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RPL21P16-201ENST00000495531 483 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 MTCO3P7-201ENST00000510008 774 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RNU2-46P-201ENST00000517038 113 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC138649.3-201ENST00000622154 254 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AC110994.2-201ENST00000635481 492 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 ASNSP3-201ENST00000451989 1306 ntBASIC2.64□□□□□ -1.99
NHLRC1Q6VVB1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AL390237.1-201ENST00000404226 1415 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 RNU6-179P-201ENST00000363350 107 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 Y_RNA.201-201ENST00000364052 96 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 SNORA71.1-201ENST00000364523 117 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 SNORA48.5-201ENST00000391143 135 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AL513475.1-201ENST00000406602 315 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 NPM1P11-201ENST00000417106 855 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC093106.2-201ENST00000428212 385 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 MTCO3P5-201ENST00000433620 714 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC098826.1-201ENST00000433943 471 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AL360221.1-201ENST00000445989 335 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC009961.3-201ENST00000449832 765 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AL590639.1-201ENST00000456484 337 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 MTCO2P18-201ENST00000457151 658 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC107626.1-201ENST00000471084 183 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC108078.2-201ENST00000510750 236 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AL117351.2-201ENST00000513571 157 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 RNU6-410P-201ENST00000517006 107 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC025755.1-201ENST00000521306 278 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC007536.1-201ENST00000533382 349 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC022880.1-201ENST00000534017 973 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 MIR4513-201ENST00000581077 86 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 OR1M4P-201ENST00000589199 287 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC119751.7-201ENST00000600494 245 ntBASIC2.63□□□□□ -1.99
NHLRC1Q6VVB1 AC245014.2-201ENST00000603689 287 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms