Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RPL21P38-201ENST00000418090 167 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC007560.1-201ENST00000426912 237 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 TOMM20P4-201ENST00000427861 435 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 MTND2P29-201ENST00000438595 412 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNORD108-201ENST00000459332 71 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 KC877373.1-201ENST00000479066 408 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC098869.1-201ENST00000481627 292 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-911P-201ENST00000516523 104 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-612P-201ENST00000516909 102 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNORA31.19-201ENST00000517079 126 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 SRGNP1-201ENST00000603392 451 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC009318.2-201ENST00000610917 651 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL355810.1-201ENST00000614629 552 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC140479.6-201ENST00000633535 357 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU1-20P-201ENST00000363314 162 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-209P-201ENST00000384118 107 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-166P-201ENST00000384371 107 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU4-70P-201ENST00000384579 139 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNORA11F-201ENST00000408237 128 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU2-64P-201ENST00000411315 191 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPS29P17-201ENST00000430795 166 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 MTCO3P29-201ENST00000432119 779 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPEP5-201ENST00000441137 268 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 PIGFP3-201ENST00000441918 722 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 snoU109.2-201ENST00000459316 135 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPL35AP15-201ENST00000468042 339 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 TRBVB-201ENST00000477100 408 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC034114.1-201ENST00000520293 285 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC012433.1-201ENST00000588916 398 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC073410.2-201ENST00000603240 332 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC010201.1-201ENST00000605051 540 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL021997.2-201ENST00000615674 271 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 SDR42E1P4-201ENST00000620894 481 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 RLIMP1-201ENST00000339626 1680 ntBASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1Q5Y7H0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC000123.3-201ENST00000624029 4975 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNA5SP509-201ENST00000364577 119 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-611P-201ENST00000384276 104 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 U3.22-201ENST00000391120 215 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNORA40C-201ENST00000391285 128 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC079354.2-201ENST00000453523 154 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPS29P27-201ENST00000463711 170 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC011276.1-201ENST00000469688 323 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC104164.2-201ENST00000496953 495 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC025465.3-201ENST00000510570 311 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-572P-201ENST00000516724 80 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNA5SP165-201ENST00000517142 115 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC023575.1-201ENST00000580510 358 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL645944.1-201ENST00000603857 493 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC008962.1-201ENST00000605729 304 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 AP002826.1-201ENST00000608835 315 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR6891-201ENST00000618788 93 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 Z75746.1-201ENST00000440243 2080 ntBASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQA1Q5Y7H0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1Q5Y7H0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1Q5Y7H0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1Q5Y7H0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1Q5Y7H0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1Q5Y7H0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQA1Q5Y7H0 Y_RNA.183-201ENST00000363882 113 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms