Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU5A-1-201ENST00000362698 116 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 RNA5SP97-201ENST00000365006 84 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 Y_RNA.324-201ENST00000365165 102 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 RNU6-395P-201ENST00000365662 106 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 RHOT1P2-201ENST00000366423 333 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 U1.1-201ENST00000384101 164 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 PTMAP5-201ENST00000393073 333 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 AL445529.1-201ENST00000398713 389 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 RNU2-3P-201ENST00000410144 191 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 CYCSP33-201ENST00000414485 327 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 RPS12P23-201ENST00000419579 400 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 AL139247.1-201ENST00000422768 325 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 HSPD1P21-201ENST00000436541 245 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 RPL23AP31-201ENST00000456160 467 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 RN7SL585P-201ENST00000470538 280 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 UBE2CP3-201ENST00000502715 450 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 ACA59.1-201ENST00000515966 143 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 AC022968.1-201ENST00000567372 442 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 MIR7702-201ENST00000621931 59 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 AL512643.1-201ENST00000635735 524 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 U6.105-201ENST00000637379 88 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 DEFB108F-201ENST00000344638 222 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 RPS29P4-201ENST00000414733 161 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AL035423.1-201ENST00000420331 213 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AC010655.3-201ENST00000478818 450 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AC006517.1-201ENST00000480485 328 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AC093852.1-201ENST00000503587 266 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AC104619.4-201ENST00000510773 249 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 Y_RNA.668-201ENST00000516233 93 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 SNORA40.14-201ENST00000516543 86 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 SCARNA13-201ENST00000516672 275 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 SNORA70.24-201ENST00000517233 118 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AC104576.1-201ENST00000524225 88 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 HSBP1P1-201ENST00000555205 166 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 AP000787.2-201ENST00000604432 568 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 SNORD58B-201ENST00000607313 66 ntBASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USPL1Q5W0Q7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 AC004925.1-201ENST00000624256 2706 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 USP9YP7-201ENST00000436723 430 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 Z98949.2-201ENST00000440996 144 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 USP9YP32-201ENST00000452432 430 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 AL133162.1-201ENST00000463228 453 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 RPL22P13-201ENST00000493291 347 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 RNU6-120P-201ENST00000516077 103 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 RNU7-4P-201ENST00000516961 62 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 AL157871.3-201ENST00000557231 293 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 Z99571.1-201ENST00000636677 394 ntBASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
USPL1Q5W0Q7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 AC073346.2-201ENST00000624724 2058 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 RNU6-238P-201ENST00000363313 106 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 DEFB109C-201ENST00000382575 264 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 DEFB109B-201ENST00000382656 264 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 AL138885.1-201ENST00000405921 675 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 MIR1252-201ENST00000408861 65 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 MRPS18CP6-201ENST00000423587 223 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 AL591419.1-201ENST00000427423 339 ntBASIC4.97□□□□□ -1.61
USPL1Q5W0Q7 AL592045.1-201ENST00000429867 352 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms