Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 SNORD14B-201ENST00000364533 90 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.291-201ENST00000364886 113 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 RNA5SP22-201ENST00000365393 109 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AL160275.2-201ENST00000412010 394 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC091390.3-201ENST00000426478 338 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 OR4C10P-201ENST00000434991 931 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AL772161.1-201ENST00000439130 476 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.706-201ENST00000516933 99 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 CASP1P1-201ENST00000526345 212 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AP001781.1-201ENST00000530977 207 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC011476.5-201ENST00000615594 130 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC090617.7-201ENST00000623952 126 ntBASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF20Q5VTR2 AC090740.1-201ENST00000623193 2262 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 MIR411-201ENST00000362239 96 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 RNA5SP307-201ENST00000362863 116 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.123-201ENST00000363338 102 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 RNY3P4-201ENST00000384428 101 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 RNU6-102P-201ENST00000384485 104 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 MIR10A-201ENST00000385043 110 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 BX679664.1-201ENST00000434429 253 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 PIGFP3-201ENST00000441918 722 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 IFNWP4-201ENST00000453148 294 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 RNU7-120P-201ENST00000459334 63 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AC008897.1-201ENST00000494006 347 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AC120057.2-201ENST00000571520 271 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AL713866.2-201ENST00000603579 219 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 MIR6780A-201ENST00000615089 68 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 U2.14-201ENST00000615943 113 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 AC240442.1-201ENST00000616055 283 ntBASIC5.34□□□□□ -1.55
RNF20Q5VTR2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF20Q5VTR2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF20Q5VTR2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
RNF20Q5VTR2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AL022722.2-201ENST00000402519 180 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 Y_RNA.623-201ENST00000411128 95 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 SNORA74C-2-201ENST00000411179 201 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 COX6CP10-201ENST00000416832 224 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC007389.2-201ENST00000434630 306 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC009963.2-201ENST00000453431 138 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 RPS29P27-201ENST00000463711 170 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 RNU7-175P-201ENST00000515915 61 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 RNU6-1212P-201ENST00000517023 104 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC010186.2-204ENST00000537668 439 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC104581.2-201ENST00000572227 430 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC023575.1-201ENST00000580510 358 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC099669.2-201ENST00000616549 437 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 AC007546.2-201ENST00000623996 360 ntBASIC5.33□□□□□ -1.56
RNF20Q5VTR2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF20Q5VTR2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 AL592182.3-201ENST00000642132 3304 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 Y_RNA.76-201ENST00000362931 109 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms