Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC008134.1-201ENST00000420943 193 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 DDX39BP1-205ENST00000422507 192 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 LINC02210-201ENST00000444561 288 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 AC009963.2-201ENST00000453431 138 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 GLUD1P3-202ENST00000508551 200 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 AC136777.2-201ENST00000522979 358 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 uc_338.18-201ENST00000615451 175 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 AP000346.3-201ENST00000622821 210 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 RNU6-793P-201ENST00000384233 104 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 RNU6-72P-201ENST00000384285 79 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 SNORD56.6-201ENST00000384569 71 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 U3.36-201ENST00000408418 213 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 Y_RNA.622-201ENST00000411091 108 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 AL354868.1-201ENST00000417077 482 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 RPL39P40-201ENST00000445481 146 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 AC083982.1-201ENST00000485679 344 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 RFPL4AP5-201ENST00000514977 504 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 RN7SL356P-201ENST00000582228 248 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 AC006116.3-201ENST00000592968 361 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 AC131238.1-201ENST00000617135 328 ntBASIC5.7□□□□□ -1.5
VARS2Q5ST30 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VARS2Q5ST30 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VARS2Q5ST30 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 BCORP1-203ENST00000513194 5093 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 Y_RNA.49-201ENST00000362714 112 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 RNU6-1125P-201ENST00000363601 107 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 MIR105-1-201ENST00000385222 81 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 RNU6-383P-201ENST00000410864 94 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC093162.1-201ENST00000419682 124 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 FTH1P6-201ENST00000430768 320 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 PGBD4P5-201ENST00000445958 426 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 SNRPGP8-201ENST00000454064 226 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC010531.2-201ENST00000465012 153 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC091179.3-201ENST00000474761 144 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC022137.1-201ENST00000483735 151 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 UBE2CP3-201ENST00000502715 450 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 IGKV1-22-201ENST00000524313 326 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 FAM25E-202ENST00000608562 189 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 AC091953.3-201ENST00000623220 236 ntBASIC5.69□□□□□ -1.5
VARS2Q5ST30 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VARS2Q5ST30 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
VARS2Q5ST30 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
VARS2Q5ST30 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VARS2Q5ST30 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VARS2Q5ST30 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 RNU6-454P-201ENST00000364292 107 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARS2Q5ST30 MIR570-201ENST00000384917 97 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 AL031003.1-201ENST00000404229 172 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 RNA5SP56-201ENST00000410277 118 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 AC245028.1-201ENST00000423259 256 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 AC007560.1-201ENST00000426912 237 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.68□□□□□ -1.5
VARS2Q5ST30 RPL39P39-201ENST00000455840 151 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 AL591473.1-201ENST00000464297 313 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 AC011276.1-201ENST00000469688 323 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 RN7SL738P-201ENST00000470264 297 ntBASIC5.68□□□□□ -1.5
VARS2Q5ST30 RN7SL346P-201ENST00000491561 294 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms