Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX4Q33E94 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RFX4Q33E94 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
RFX4Q33E94 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RFX4Q33E94 AL031577.2-201ENST00000404133 280 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX4Q33E94 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX4Q33E94 BPY2DP-201ENST00000422208 265 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX4Q33E94 RPS15AP5-201ENST00000436276 388 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX4Q33E94 SSXP1-201ENST00000453640 473 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC109486.1-201ENST00000486833 374 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC139453.3-201ENST00000493276 369 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.1□□□□□ -2.07
RFX4Q33E94 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX4Q33E94 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX4Q33E94 RPS3AP4-201ENST00000555161 764 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX4Q33E94 MIR548AB-201ENST00000584917 84 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC007621.1-201ENST00000604544 437 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC103810.6-201ENST00000606708 136 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC135507.1-201ENST00000607214 561 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC138749.5-201ENST00000611461 208 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC116165.2-201ENST00000616705 206 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AP003485.2-201ENST00000623636 610 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 AC120349.3-201ENST00000624377 529 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.1□□□□□ -2.07
RFX4Q33E94 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.09□□□□□ -2.07
RFX4Q33E94 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RFX4Q33E94 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFX4Q33E94 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFX4Q33E94 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.09□□□□□ -2.07
RFX4Q33E94 ELF2P3-201ENST00000445099 1506 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 OR56A5-201ENST00000340110 738 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RNU6-188P-201ENST00000364207 107 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RNU5E-5P-201ENST00000365379 116 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 OR5H15-201ENST00000383696 930 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFX4Q33E94 FCF1P10-201ENST00000407590 479 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.09□□□□□ -2.07
RFX4Q33E94 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.09□□□□□ -2.07
RFX4Q33E94 RPS15AP12-201ENST00000419498 388 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 MTND4P20-201ENST00000424125 869 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AL356583.2-201ENST00000426536 280 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC104651.1-201ENST00000427559 735 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 GPM6BP2-201ENST00000432046 144 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RPS15AP28-201ENST00000435088 386 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFX4Q33E94 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.09□□□□□ -2.07
RFX4Q33E94 NEFMP1-201ENST00000443423 1006 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 GPM6BP1-201ENST00000446387 144 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RPS3P1-201ENST00000456781 192 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.09□□□□□ -2.07
RFX4Q33E94 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.09□□□□□ -2.07
RFX4Q33E94 MTND1P22-201ENST00000510572 951 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RNA5SP148-201ENST00000516527 94 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC106038.2-201ENST00000520706 568 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 DUXAP5-201ENST00000529668 529 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC021269.2-201ENST00000532318 330 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.09□□□□□ -2.07
RFX4Q33E94 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.09□□□□□ -2.07
RFX4Q33E94 HMGN1P30-201ENST00000589286 268 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RFX4Q33E94 AC012065.4-201ENST00000602445 679 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC121334.2-201ENST00000605387 271 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AL031775.1-201ENST00000607014 887 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC122133.1-201ENST00000613964 233 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC091304.6-201ENST00000619761 202 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AF246928.1-201ENST00000623768 87 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AL160394.1-201ENST00000624765 724 ntBASIC2.09□□□□□ -2.07
RFX4Q33E94 AC004944.1-201ENST00000517807 3059 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU6-288P-201ENST00000363690 104 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 Y_RNA.169-201ENST00000363745 96 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU5E-6P-201ENST00000365574 115 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
RFX4Q33E94 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU1-73P-201ENST00000383971 164 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU2-68P-201ENST00000410878 191 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.08□□□□□ -2.08
RFX4Q33E94 Z99497.1-201ENST00000421282 135 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AL365203.2-201ENST00000423444 196 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RAC1P6-201ENST00000423911 575 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC007283.2-201ENST00000424739 197 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AL592045.1-201ENST00000429867 352 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 RPL36AP53-201ENST00000432891 316 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.08□□□□□ -2.08
RFX4Q33E94 HMGB3P12-201ENST00000438745 556 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 MTND1P12-201ENST00000455231 147 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms