Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 AC007038.2-201ENST00000608095 740 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 SNORA23-201ENST00000365128 182 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 RNU6-19P-201ENST00000384718 107 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 AC118273.2-201ENST00000532092 465 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AC092470.1-201ENST00000546187 132 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 MIR4723-201ENST00000585070 81 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 PRR13P7-201ENST00000605538 430 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AP002826.1-201ENST00000608835 315 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HMGXB3Q12766 ZNF702P-202ENST00000434269 1966 ntBASIC1.09□□□□□ -2.23
HMGXB3Q12766 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 RNU6-1197P-201ENST00000391183 107 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HMGXB3Q12766 SFR1P2-201ENST00000421841 730 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL714022.1-201ENST00000439897 151 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 RNU7-23P-201ENST00000459465 62 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AC116337.2-201ENST00000477662 156 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 SNORA70.16-201ENST00000516390 95 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.09□□□□□ -2.24
HMGXB3Q12766 MIR4299-201ENST00000577899 72 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL136313.1-201ENST00000624804 202 ntBASIC1.09□□□□□ -2.24
HMGXB3Q12766 AL159152.1-201ENST00000635019 2587 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 RNU6-220P-201ENST00000390919 107 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 AL356131.1-201ENST00000405826 414 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 RN7SKP158-201ENST00000410453 326 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 RNU6-712P-201ENST00000410558 100 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 VN1R36P-201ENST00000414936 291 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGXB3Q12766 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGXB3Q12766 AC092573.2-201ENST00000434546 243 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 FGF7P5-201ENST00000441829 291 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 RPS20P10-201ENST00000451209 253 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 snoU13.19-201ENST00000459148 104 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 KLF3P2-201ENST00000465138 268 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.08□□□□□ -2.24
HMGXB3Q12766 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HMGXB3Q12766 RNU4-18P-201ENST00000516751 149 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 SCARNA1-201ENST00000517138 166 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 AP003355.1-201ENST00000518956 587 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 AP003399.1-201ENST00000637534 361 ntBASIC1.08□□□□□ -2.24
HMGXB3Q12766 RNU6-339P-201ENST00000384310 107 ntBASIC1.07□□□□□ -2.24
HMGXB3Q12766 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.07□□□□□ -2.24
HMGXB3Q12766 RPL9P9-202ENST00000466501 579 ntBASIC1.07□□□□□ -2.24
HMGXB3Q12766 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGXB3Q12766 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGXB3Q12766 AP005639.2-201ENST00000527592 928 ntBASIC1.07□□□□□ -2.24
HMGXB3Q12766 OR5AL2P-201ENST00000532185 920 ntBASIC1.07□□□□□ -2.24
HMGXB3Q12766 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGXB3Q12766 AC013244.2-201ENST00000603396 103 ntBASIC1.07□□□□□ -2.24
HMGXB3Q12766 AC025588.2-201ENST00000604851 466 ntBASIC1.07□□□□□ -2.24
HMGXB3Q12766 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HMGXB3Q12766 MIR126-201ENST00000362291 85 ntBASIC1.06□□□□□ -2.24
HMGXB3Q12766 snoU109.1-201ENST00000459339 135 ntBASIC1.06□□□□□ -2.24
HMGXB3Q12766 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGXB3Q12766 LINC00933-203ENST00000559812 219 ntBASIC1.06□□□□□ -2.24
HMGXB3Q12766 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGXB3Q12766 AL773524.1-201ENST00000614065 229 ntBASIC1.06□□□□□ -2.24
HMGXB3Q12766 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMGXB3Q12766 AC010329.5-201ENST00000623497 2174 ntBASIC1.06□□□□□ -2.24
HMGXB3Q12766 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 RNU6-167P-201ENST00000384292 106 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 DSTNP4-201ENST00000399472 474 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AL136372.1-201ENST00000403060 228 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 Z82190.1-201ENST00000454534 490 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 RNU6-420P-201ENST00000458780 107 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC107626.1-201ENST00000471084 183 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 MIR4653-201ENST00000585107 83 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC023932.2-201ENST00000603176 175 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC079791.1-201ENST00000605356 973 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC013468.1-201ENST00000608680 598 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 MTND2P41-201ENST00000637599 773 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 RNU6-989P-201ENST00000362756 107 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC027575.1-201ENST00000481064 460 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 SCARNA11.3-201ENST00000517276 130 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGXB3Q12766 AC010615.3-201ENST00000597319 394 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 AL592148.2-201ENST00000612210 372 ntBASIC1.05□□□□□ -2.24
HMGXB3Q12766 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HMGXB3Q12766 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HMGXB3Q12766 RNU6-222P-201ENST00000362438 107 ntBASIC1.04□□□□□ -2.24
HMGXB3Q12766 RNU4-23P-201ENST00000362839 140 ntBASIC1.04□□□□□ -2.24
HMGXB3Q12766 RNU6-821P-201ENST00000390995 107 ntBASIC1.04□□□□□ -2.24
HMGXB3Q12766 MIR934-201ENST00000401241 83 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms