Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.33□□□□□ -2.04
CKAP4Q07065 AL133153.1-201ENST00000557756 303 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.33□□□□□ -2.04
CKAP4Q07065 OR1M4P-201ENST00000589199 287 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 KC877982.1-201ENST00000602313 470 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC012443.1-201ENST00000605605 231 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.33□□□□□ -2.04
CKAP4Q07065 AC093838.1-201ENST00000613014 469 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC072046.2-201ENST00000618366 268 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 MIR6075-201ENST00000620782 95 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC112204.3-201ENST00000623822 332 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CKAP4Q07065 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CKAP4Q07065 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CKAP4Q07065 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CKAP4Q07065 AL139276.1-201ENST00000311910 1001 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU5E-1-201ENST00000362477 120 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNY4P34-201ENST00000364779 95 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU6-637P-201ENST00000384050 107 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU5A-6P-201ENST00000384136 116 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU6-882P-201ENST00000391025 103 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU2-8P-201ENST00000410727 190 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 PIGFP2-201ENST00000421400 651 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RPL27AP8-201ENST00000424277 446 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AC019097.1-201ENST00000424783 735 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AL365496.1-201ENST00000426885 215 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AC104651.1-201ENST00000427559 735 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC022483.1-201ENST00000514020 567 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU6-798P-201ENST00000516912 103 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 RNU1-104P-201ENST00000517280 175 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AC245505.1-201ENST00000556398 224 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.32□□□□□ -2.04
CKAP4Q07065 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.32□□□□□ -2.04
CKAP4Q07065 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AC007038.2-201ENST00000608095 740 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 AC004908.2-201ENST00000609090 574 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CKAP4Q07065 MTCO1P9-201ENST00000505577 1534 ntBASIC2.32□□□□□ -2.04
CKAP4Q07065 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 OR5J1P-201ENST00000313544 939 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CKAP4Q07065 HSPE1P11-201ENST00000339579 310 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CKAP4Q07065 RNU5E-8P-201ENST00000363502 116 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RNY4P16-201ENST00000364768 94 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RN7SKP226-201ENST00000364912 300 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RNU6-1215P-201ENST00000384441 102 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 SNORA67.4-201ENST00000384688 142 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CKAP4Q07065 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 MRPL42P2-201ENST00000403169 426 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AL513475.1-201ENST00000406602 315 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RNU2-43P-201ENST00000410306 190 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 Y_RNA.619-201ENST00000410951 90 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RNU6-516P-201ENST00000411381 104 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CKAP4Q07065 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.31□□□□□ -2.04
CKAP4Q07065 RPS3AP44-201ENST00000425466 790 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC063976.3-201ENST00000426849 329 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC009414.1-201ENST00000427200 443 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 ISCA1P6-201ENST00000427740 390 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC090774.1-201ENST00000435925 246 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC104850.1-201ENST00000435940 476 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RPL35AP22-201ENST00000436855 335 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 USP9YP15-201ENST00000442391 422 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC009296.1-201ENST00000443146 155 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC079448.1-201ENST00000449377 373 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AC108059.3-201ENST00000456388 214 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RNU7-59P-201ENST00000459101 61 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RBM43P1-201ENST00000476891 1081 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC004924.1-201ENST00000480160 781 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC010587.1-201ENST00000505809 469 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 RNA5SP471-201ENST00000516971 106 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CKAP4Q07065 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 CASP1P1-201ENST00000526345 212 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AP003072.2-201ENST00000527756 676 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms