Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 SNORA31.3-201ENST00000516029 96 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 Y_RNA.672-201ENST00000516289 104 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 RNA5SP165-201ENST00000517142 115 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.69□□□□□ -1.98
GABPAQ06546 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.69□□□□□ -1.98
GABPAQ06546 AL391261.3-201ENST00000557194 520 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 HMGN2P15-201ENST00000585707 270 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC025811.1-201ENST00000604312 472 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC007363.1-201ENST00000604736 620 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC068276.1-201ENST00000605793 379 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AL359198.2-201ENST00000611836 194 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
GABPAQ06546 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.69□□□□□ -1.98
GABPAQ06546 AC008250.2-201ENST00000615261 205 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 MIR6766-201ENST00000622641 72 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.69□□□□□ -1.98
GABPAQ06546 AC110079.1-202ENST00000635213 138 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 MTND5P29-201ENST00000458676 1807 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GABPAQ06546 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.69□□□□□ -1.98
GABPAQ06546 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GABPAQ06546 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GABPAQ06546 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GABPAQ06546 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
GABPAQ06546 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
GABPAQ06546 U8.8-201ENST00000365399 135 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 RNU5E-6P-201ENST00000365574 115 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 RNU6-14P-201ENST00000384630 106 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.68□□□□□ -1.98
GABPAQ06546 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.68□□□□□ -1.98
GABPAQ06546 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.68□□□□□ -1.98
GABPAQ06546 AC137499.1-201ENST00000427602 88 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.68□□□□□ -1.98
GABPAQ06546 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.68□□□□□ -1.98
GABPAQ06546 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.68□□□□□ -1.98
GABPAQ06546 AC096638.1-201ENST00000444678 216 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 SNRPFP4-201ENST00000456366 242 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.68□□□□□ -1.98
GABPAQ06546 snoU13.15-201ENST00000459407 104 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 RPS29P20-201ENST00000489592 171 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 RPS27P26-201ENST00000494583 239 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.68□□□□□ -1.98
GABPAQ06546 RPS3AP4-201ENST00000555161 764 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.68□□□□□ -1.98
GABPAQ06546 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.68□□□□□ -1.98
GABPAQ06546 AC104763.2-201ENST00000604179 382 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AC108479.2-201ENST00000617314 601 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 AC099654.13-201ENST00000639774 207 ntBASIC2.68□□□□□ -1.98
GABPAQ06546 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.68□□□□□ -1.98
GABPAQ06546 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.67□□□□□ -1.98
GABPAQ06546 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
GABPAQ06546 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 SNORD56.2-201ENST00000363242 71 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RNU1-105P-201ENST00000363470 161 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RNU6-188P-201ENST00000364207 107 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RNY4P34-201ENST00000364779 95 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 SNORA40.3-201ENST00000390964 122 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
GABPAQ06546 RNU2-68P-201ENST00000410878 191 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RPS3AP3-201ENST00000411933 242 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 ELOCP4-201ENST00000420090 333 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 AL365496.1-201ENST00000426885 215 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.67□□□□□ -1.98
GABPAQ06546 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
GABPAQ06546 UBBP3-201ENST00000445497 241 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.67□□□□□ -1.98
GABPAQ06546 AL353705.4-201ENST00000449661 238 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.67□□□□□ -1.98
GABPAQ06546 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.67□□□□□ -1.98
GABPAQ06546 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 RPL26P9-201ENST00000457466 433 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RPL9P6-201ENST00000492764 598 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 SUMO2P6-201ENST00000505273 288 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RNU6-1092P-201ENST00000516955 87 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 RNU2-46P-201ENST00000517038 113 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
GABPAQ06546 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 AC012414.6-201ENST00000568241 401 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.67□□□□□ -1.98
GABPAQ06546 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 CLIC4P2-201ENST00000601934 717 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC073114.1-201ENST00000612027 490 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC022079.1-201ENST00000621546 602 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.67□□□□□ -1.98
GABPAQ06546 AC068880.5-201ENST00000624331 290 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 AL603839.4-201ENST00000624658 1005 ntBASIC2.67□□□□□ -1.98
GABPAQ06546 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
GABPAQ06546 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
GABPAQ06546 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
GABPAQ06546 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms