Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.36□□□□□ -2.19
H3F3AP84243 AL354943.1-201ENST00000572103 781 ntBASIC1.36□□□□□ -2.19
H3F3AP84243 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.36□□□□□ -2.19
H3F3AP84243 AC104984.5-201ENST00000586878 94 ntBASIC1.36□□□□□ -2.19
H3F3AP84243 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.36□□□□□ -2.19
H3F3AP84243 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.36□□□□□ -2.19
H3F3AP84243 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.36□□□□□ -2.19
H3F3AP84243 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.36□□□□□ -2.19
H3F3AP84243 AC100814.1-201ENST00000606963 623 ntBASIC1.36□□□□□ -2.19
H3F3AP84243 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.36□□□□□ -2.19
H3F3AP84243 AC003001.2-201ENST00000616294 831 ntBASIC1.36□□□□□ -2.19
H3F3AP84243 AC092192.1-201ENST00000633154 1018 ntBASIC1.36□□□□□ -2.19
H3F3AP84243 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.35□□□□□ -2.19
H3F3AP84243 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
H3F3AP84243 SNORD115-3-201ENST00000363100 82 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 RNU6-216P-201ENST00000363282 104 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.35□□□□□ -2.19
H3F3AP84243 AC007435.1-201ENST00000421086 415 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 MRPL42P4-201ENST00000453267 443 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.35□□□□□ -2.19
H3F3AP84243 BX322784.1-201ENST00000455793 1077 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.35□□□□□ -2.19
H3F3AP84243 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.35□□□□□ -2.19
H3F3AP84243 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.35□□□□□ -2.19
H3F3AP84243 AC012213.3-201ENST00000577199 777 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 AC073544.2-201ENST00000601155 540 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 AL355598.1-201ENST00000604169 202 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 AC025754.2-201ENST00000606491 432 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 DUSP12P1-201ENST00000612874 516 ntBASIC1.35□□□□□ -2.19
H3F3AP84243 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.35□□□□□ -2.19
H3F3AP84243 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.35□□□□□ -2.19
H3F3AP84243 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.35□□□□□ -2.19
H3F3AP84243 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.35□□□□□ -2.19
H3F3AP84243 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
H3F3AP84243 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.34□□□□□ -2.19
H3F3AP84243 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
H3F3AP84243 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.34□□□□□ -2.19
H3F3AP84243 SNORA17.3-201ENST00000391159 129 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 CISD1P1-201ENST00000393907 327 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
H3F3AP84243 MIR1323-201ENST00000408090 73 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.34□□□□□ -2.19
H3F3AP84243 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
H3F3AP84243 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.34□□□□□ -2.19
H3F3AP84243 AL353706.1-201ENST00000436728 494 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.34□□□□□ -2.19
H3F3AP84243 AL137159.1-201ENST00000452808 512 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.34□□□□□ -2.19
H3F3AP84243 AC013267.1-201ENST00000458227 267 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 RNU6-581P-201ENST00000516214 105 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.34□□□□□ -2.19
H3F3AP84243 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.34□□□□□ -2.19
H3F3AP84243 AC022254.1-201ENST00000567857 235 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 AF038458.1-201ENST00000588406 262 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.34□□□□□ -2.19
H3F3AP84243 AC103810.8-201ENST00000607347 118 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
H3F3AP84243 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.34□□□□□ -2.19
H3F3AP84243 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
H3F3AP84243 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
H3F3AP84243 RNU6-97P-201ENST00000363387 104 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 MIR95-201ENST00000385072 81 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 MIR320A-201ENST00000385302 82 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 MIR934-201ENST00000401241 83 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AL591034.2-201ENST00000402839 359 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.33□□□□□ -2.2
H3F3AP84243 DPRXP1-201ENST00000426312 460 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.33□□□□□ -2.2
H3F3AP84243 AC092001.1-201ENST00000453012 261 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC112771.1-201ENST00000463581 102 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC027575.1-201ENST00000481064 460 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC018868.1-201ENST00000491307 315 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC018437.1-201ENST00000492214 406 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC114981.1-201ENST00000503897 678 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 MTND5P13-201ENST00000513046 1079 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 SNORA48.11-201ENST00000517015 89 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 MIR4524B-201ENST00000581569 115 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC092953.2-201ENST00000608000 699 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC243773.3-201ENST00000613270 256 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 TUG1_2.1-201ENST00000614234 87 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AL353997.5-201ENST00000618886 171 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AC009268.2-201ENST00000621925 457 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
H3F3AP84243 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
H3F3AP84243 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.32□□□□□ -2.2
H3F3AP84243 AC027644.1-201ENST00000419595 298 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 HMGB1P27-201ENST00000431429 603 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 RPL36AP53-201ENST00000432891 316 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 SEPT7P5-201ENST00000434048 306 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 USP9YP24-201ENST00000434374 697 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 MTND2P29-201ENST00000438595 412 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms