Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AC007560.1-201ENST00000426912 237 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC005300.1-201ENST00000428401 373 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 HMGB1P9-201ENST00000429856 646 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AL078601.1-201ENST00000444542 271 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RPS15AP27-201ENST00000449183 343 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AL583843.1-201ENST00000456070 346 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC092798.1-201ENST00000458542 409 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CL1P78423 FCF1P8-201ENST00000510322 597 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RNU4-29P-201ENST00000515943 174 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 MIR2276-201ENST00000516886 89 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC107934.2-201ENST00000518653 310 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CL1P78423 MTND1P35-201ENST00000526739 508 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 BNIP3P6-201ENST00000549284 499 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AL138976.2-201ENST00000563989 694 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 MIR4424-201ENST00000585257 86 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CL1P78423 NUTF2P8-201ENST00000604593 363 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 uc_338.34-201ENST00000617467 174 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CL1P78423 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CL1P78423 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AP003122.6-201ENST00000623831 495 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CL1P78423 MTND4P14-201ENST00000435799 1354 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CL1P78423 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CL1P78423 MIR412-201ENST00000362142 91 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 RNU6-451P-201ENST00000362921 107 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 RNY3P3-201ENST00000363816 102 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 RNU4-20P-201ENST00000365601 151 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 Z98749.2-208ENST00000381646 500 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 RNU6-45P-201ENST00000384471 107 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 SNORA16.2-201ENST00000390991 127 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CL1P78423 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 BTF3P7-201ENST00000407097 488 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 Z99755.1-201ENST00000414048 380 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 MTATP6P13-201ENST00000438531 667 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AC104472.2-201ENST00000469035 601 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 RPL21P13-201ENST00000488305 481 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CL1P78423 CCDC34P1-201ENST00000507441 517 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AC008716.1-201ENST00000511084 513 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.7□□□□□ -1.98
CX3CL1P78423 IGKV2-26-201ENST00000518305 343 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 CYCSP39-201ENST00000565821 309 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CL1P78423 MIR4782-201ENST00000577987 79 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CL1P78423 MIR5692A1-201ENST00000580523 69 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AC004852.3-201ENST00000614131 326 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CL1P78423 AL160394.1-201ENST00000624765 724 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 AP003400.5-201ENST00000624827 617 ntBASIC2.7□□□□□ -1.98
CX3CL1P78423 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CX3CL1P78423 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CL1P78423 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CL1P78423 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CL1P78423 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CL1P78423 AC110491.1-201ENST00000562191 2010 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CX3CL1P78423 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.69□□□□□ -1.98
CX3CL1P78423 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CX3CL1P78423 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CX3CL1P78423 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CX3CL1P78423 Y_RNA.89-201ENST00000363031 102 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 RNU6-799P-201ENST00000363567 107 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 RNA5SP50-201ENST00000363731 107 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 SNORD14B-201ENST00000364533 90 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 RNU6-534P-201ENST00000364877 106 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 Y_RNA.453-201ENST00000384223 109 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 SNORD70.1-201ENST00000391007 85 ntBASIC2.69□□□□□ -1.98
CX3CL1P78423 AL592114.1-201ENST00000403842 483 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms