Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.33□□□□□ -2.04
IRX3P78415 FABP5P13-201ENST00000452144 328 ntBASIC2.33□□□□□ -2.04
IRX3P78415 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 PMCHL2-203ENST00000457791 237 ntBASIC2.33□□□□□ -2.04
IRX3P78415 AL160314.1-201ENST00000490836 438 ntBASIC2.33□□□□□ -2.04
IRX3P78415 RN7SL274P-201ENST00000492268 272 ntBASIC2.33□□□□□ -2.04
IRX3P78415 AC147055.4-201ENST00000504399 745 ntBASIC2.33□□□□□ -2.04
IRX3P78415 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.33□□□□□ -2.04
IRX3P78415 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.33□□□□□ -2.04
IRX3P78415 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
IRX3P78415 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.33□□□□□ -2.04
IRX3P78415 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 MTND4P33-201ENST00000556706 766 ntBASIC2.33□□□□□ -2.04
IRX3P78415 AC110588.1-201ENST00000559699 137 ntBASIC2.33□□□□□ -2.04
IRX3P78415 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.33□□□□□ -2.04
IRX3P78415 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.33□□□□□ -2.04
IRX3P78415 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
IRX3P78415 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
IRX3P78415 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.33□□□□□ -2.04
IRX3P78415 AC008555.8-201ENST00000623602 2168 ntBASIC2.33□□□□□ -2.04
IRX3P78415 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.32□□□□□ -2.04
IRX3P78415 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
IRX3P78415 RNU6-289P-201ENST00000364093 107 ntBASIC2.32□□□□□ -2.04
IRX3P78415 SNORA4.1-201ENST00000364263 144 ntBASIC2.32□□□□□ -2.04
IRX3P78415 RNA5SP213-201ENST00000391031 106 ntBASIC2.32□□□□□ -2.04
IRX3P78415 MIR888-201ENST00000401186 77 ntBASIC2.32□□□□□ -2.04
IRX3P78415 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.32□□□□□ -2.04
IRX3P78415 USP9YP13-201ENST00000417797 480 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AL451054.2-201ENST00000420896 202 ntBASIC2.32□□□□□ -2.04
IRX3P78415 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.32□□□□□ -2.04
IRX3P78415 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.32□□□□□ -2.04
IRX3P78415 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.32□□□□□ -2.04
IRX3P78415 AC004383.1-201ENST00000438135 289 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AC016691.1-201ENST00000441321 413 ntBASIC2.32□□□□□ -2.04
IRX3P78415 MTCO3P45-201ENST00000443036 613 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.32□□□□□ -2.04
IRX3P78415 EEF1E1P1-201ENST00000446998 430 ntBASIC2.32□□□□□ -2.04
IRX3P78415 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.32□□□□□ -2.04
IRX3P78415 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.32□□□□□ -2.04
IRX3P78415 AC109486.1-201ENST00000486833 374 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AC138853.1-201ENST00000503549 823 ntBASIC2.32□□□□□ -2.04
IRX3P78415 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
IRX3P78415 RNU6-928P-201ENST00000516876 104 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.32□□□□□ -2.04
IRX3P78415 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.32□□□□□ -2.04
IRX3P78415 AC002545.1-201ENST00000592511 181 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AL139344.1-201ENST00000605228 195 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AC016727.1-205ENST00000605437 569 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AC080013.3-201ENST00000606839 578 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AC244517.12-201ENST00000623581 663 ntBASIC2.32□□□□□ -2.04
IRX3P78415 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.32□□□□□ -2.04
IRX3P78415 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
IRX3P78415 RNU6-931P-201ENST00000363850 107 ntBASIC2.31□□□□□ -2.04
IRX3P78415 Y_RNA.548-201ENST00000384656 105 ntBASIC2.31□□□□□ -2.04
IRX3P78415 RNU6-220P-201ENST00000390919 107 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.31□□□□□ -2.04
IRX3P78415 USP9YP26-201ENST00000421008 661 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AC099548.1-201ENST00000421443 426 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AIMP1P2-201ENST00000425294 312 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
IRX3P78415 MTCO2P20-201ENST00000437339 673 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.31□□□□□ -2.04
IRX3P78415 AC124916.1-201ENST00000444020 547 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AP000542.1-201ENST00000448473 371 ntBASIC2.31□□□□□ -2.04
IRX3P78415 RPL23AP35-201ENST00000451906 501 ntBASIC2.31□□□□□ -2.04
IRX3P78415 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.31□□□□□ -2.04
IRX3P78415 RNU7-59P-201ENST00000459101 61 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.31□□□□□ -2.04
IRX3P78415 RNU5A-4P-201ENST00000516588 111 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.31□□□□□ -2.04
IRX3P78415 MTCO2P15-201ENST00000532655 656 ntBASIC2.31□□□□□ -2.04
IRX3P78415 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.31□□□□□ -2.04
IRX3P78415 MTCO2P2-201ENST00000591258 225 ntBASIC2.31□□□□□ -2.04
IRX3P78415 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
IRX3P78415 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
IRX3P78415 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
IRX3P78415 RNU6-853P-201ENST00000364306 107 ntBASIC2.3□□□□□ -2.04
IRX3P78415 MIR325-201ENST00000385260 98 ntBASIC2.3□□□□□ -2.04
IRX3P78415 MTCO2P21-201ENST00000419780 677 ntBASIC2.3□□□□□ -2.04
IRX3P78415 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.3□□□□□ -2.04
IRX3P78415 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.3□□□□□ -2.04
IRX3P78415 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
IRX3P78415 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.3□□□□□ -2.04
IRX3P78415 AC114786.4-201ENST00000508771 728 ntBASIC2.3□□□□□ -2.04
IRX3P78415 LTV1P1-201ENST00000510683 1237 ntBASIC2.3□□□□□ -2.04
IRX3P78415 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.3□□□□□ -2.04
IRX3P78415 AC114797.1-201ENST00000514003 728 ntBASIC2.3□□□□□ -2.04
IRX3P78415 RNU6-927P-201ENST00000516199 100 ntBASIC2.3□□□□□ -2.04
IRX3P78415 RNU6-311P-201ENST00000516224 102 ntBASIC2.3□□□□□ -2.04
IRX3P78415 SNORA31.23-201ENST00000517219 133 ntBASIC2.3□□□□□ -2.04
IRX3P78415 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
IRX3P78415 AC023538.1-201ENST00000534576 736 ntBASIC2.3□□□□□ -2.04
IRX3P78415 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.3□□□□□ -2.04
IRX3P78415 MRPS36P5-201ENST00000551909 298 ntBASIC2.3□□□□□ -2.04
IRX3P78415 NACAP3-201ENST00000552100 481 ntBASIC2.3□□□□□ -2.04
IRX3P78415 MIR5571-201ENST00000577998 113 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms