Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-4P-201ENST00000384205 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-5P-201ENST00000384238 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-3P-201ENST00000384314 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-2-201ENST00000384627 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-9-201ENST00000384776 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-33P-201ENST00000384793 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU1-119P-201ENST00000391122 165 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPL39P62891 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPL39P62891 OR51AB1P-201ENST00000429046 620 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.09□□□□□ -2.42
RPL39P62891 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPL39P62891 RNA5SP112-201ENST00000515937 99 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 SNORA31.8-201ENST00000516327 108 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.09□□□□□ -2.42
RPL39P62891 SUB1P4-201ENST00000566062 339 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-6P-201ENST00000606623 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 AL355810.1-201ENST00000614629 552 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 MIR8074-201ENST00000615081 81 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 MIR6718-201ENST00000616153 80 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
RPL39P62891 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC-0.09□□□□□ -2.42
RPL39P62891 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.42
RPL39P62891 U3.9-201ENST00000363823 204 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 SNORA25.9-201ENST00000365087 128 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 RNU6-45P-201ENST00000384471 107 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.1□□□□□ -2.43
RPL39P62891 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
RPL39P62891 USP9YP26-201ENST00000421008 661 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 USP9YP18-201ENST00000425912 695 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 USP9YP24-201ENST00000434374 697 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 USP9YP17-201ENST00000444617 696 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 SNORD124-201ENST00000459577 104 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 CYCTP-201ENST00000504253 315 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC-0.1□□□□□ -2.43
RPL39P62891 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.1□□□□□ -2.43
RPL39P62891 AC069304.3-201ENST00000603938 1084 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 AC112191.3-201ENST00000604371 277 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 AC138473.1-201ENST00000605717 526 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 AC034236.3-201ENST00000605999 461 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 MTCO1P23-201ENST00000415223 1526 ntBASIC-0.1□□□□□ -2.43
RPL39P62891 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
RPL39P62891 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
RPL39P62891 SNORD114-16-201ENST00000363044 70 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 RPL21P1-201ENST00000399532 476 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 MTCO2P12-201ENST00000427426 682 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL39P62891 AC073614.1-201ENST00000438690 650 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL39P62891 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AC108740.1-201ENST00000498629 225 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 RNA5SP436-201ENST00000516020 115 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 RNU4-77P-201ENST00000516692 156 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 RN7SKP5-201ENST00000517045 272 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.11□□□□□ -2.43
RPL39P62891 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL39P62891 MIR4514-201ENST00000581410 57 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL39P62891 AL355877.2-201ENST00000603670 358 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AP000654.2-201ENST00000605633 586 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL39P62891 BX284668.6-201ENST00000606899 438 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 OR5AK4P-201ENST00000635912 903 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AC099654.5-201ENST00000636479 350 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 AP003399.1-201ENST00000637534 361 ntBASIC-0.11□□□□□ -2.43
RPL39P62891 SLC10A5P1-201ENST00000379063 1306 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AC090625.1-201ENST00000357130 210 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 RNU5D-1-201ENST00000363299 116 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 RNU1-96P-201ENST00000364163 162 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 RNU4-67P-201ENST00000364569 141 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 RNU6-945P-201ENST00000383947 107 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 SNORA25-201ENST00000384384 134 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
RPL39P62891 RNU1-139P-201ENST00000391307 165 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AC092634.6-201ENST00000418558 192 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 JTBP1-201ENST00000441314 247 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 MTND1P16-201ENST00000465177 898 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 RPS26P45-201ENST00000471748 340 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC-0.12□□□□□ -2.43
RPL39P62891 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC-0.12□□□□□ -2.43
RPL39P62891 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC-0.12□□□□□ -2.43
RPL39P62891 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC-0.12□□□□□ -2.43
RPL39P62891 AC012435.1-202ENST00000568772 240 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AP001596.2-201ENST00000608410 312 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AC104465.1-201ENST00000611365 139 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 HOTTIP_4.1-201ENST00000618195 165 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AC007792.1-201ENST00000623023 402 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AP006248.3-201ENST00000623580 594 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 AC095038.3-201ENST00000634439 195 ntBASIC-0.12□□□□□ -2.43
RPL39P62891 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC-0.12□□□□□ -2.43
RPL39P62891 SNORA63.3-201ENST00000362682 132 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 MIR605-201ENST00000385078 83 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
RPL39P62891 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 CETN4P-201ENST00000432407 469 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.13□□□□□ -2.43
RPL39P62891 AC233702.2-202ENST00000562547 291 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 AC091489.2-201ENST00000566263 604 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms