Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNU6-582P-201ENST00000362989 107 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 MIR1323-201ENST00000408090 73 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AL451054.2-201ENST00000420896 202 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.93□□□□□ -2.26
CKS1BP61024 HMGB3P12-201ENST00000438745 556 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.93□□□□□ -2.26
CKS1BP61024 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.93□□□□□ -2.26
CKS1BP61024 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.93□□□□□ -2.26
CKS1BP61024 MTCYBP16-201ENST00000509187 1129 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.93□□□□□ -2.26
CKS1BP61024 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.93□□□□□ -2.26
CKS1BP61024 AC125611.1-201ENST00000549563 229 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AC015720.1-201ENST00000565251 277 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AC012213.3-201ENST00000577199 777 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AL355598.1-201ENST00000604169 202 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AL355802.3-201ENST00000607571 545 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 AC021755.4-201ENST00000616620 456 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.93□□□□□ -2.26
CKS1BP61024 AC026634.1-201ENST00000634369 198 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CKS1BP61024 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CKS1BP61024 MTND5P9-201ENST00000503854 1755 ntBASIC0.93□□□□□ -2.26
CKS1BP61024 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CKS1BP61024 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.92□□□□□ -2.26
CKS1BP61024 Y_RNA.111-201ENST00000363248 100 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 MIR597-201ENST00000384968 97 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 MIR758-201ENST00000390227 88 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 SNRPEP2-201ENST00000397592 279 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 MIR1285-1-201ENST00000408593 84 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.92□□□□□ -2.26
CKS1BP61024 RPL30P7-201ENST00000479312 323 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 RNU1-92P-201ENST00000517017 135 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.92□□□□□ -2.26
CKS1BP61024 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.92□□□□□ -2.26
CKS1BP61024 AF131215.7-201ENST00000602443 707 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 AC069304.2-201ENST00000605154 435 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 BNIP3P19-201ENST00000605397 577 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 AC097468.3-201ENST00000607956 456 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.92□□□□□ -2.26
CKS1BP61024 TEX21P-201ENST00000447107 1476 ntBASIC0.92□□□□□ -2.26
CKS1BP61024 RNU6-439P-201ENST00000384188 106 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 SNORD14D-201ENST00000384390 87 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 RNA5SP100-201ENST00000410903 110 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 RNA5SP59-201ENST00000410922 110 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 RN7SKP284-201ENST00000411002 343 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AC007435.1-201ENST00000421086 415 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 ELOCP14-201ENST00000428070 331 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 ELOCP7-201ENST00000439968 331 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 MTCO1P44-201ENST00000441935 243 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 DYNLT3P2-201ENST00000442517 295 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.91□□□□□ -2.26
CKS1BP61024 BX322784.1-201ENST00000455793 1077 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.91□□□□□ -2.26
CKS1BP61024 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.91□□□□□ -2.26
CKS1BP61024 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AP003122.4-201ENST00000530980 758 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.91□□□□□ -2.26
CKS1BP61024 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.91□□□□□ -2.26
CKS1BP61024 AC025918.2-201ENST00000558683 763 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 MIR3683-201ENST00000580847 82 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.91□□□□□ -2.26
CKS1BP61024 AL158211.4-201ENST00000606988 584 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AC009032.1-201ENST00000617574 431 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.91□□□□□ -2.26
CKS1BP61024 AP005901.5-201ENST00000545779 1796 ntBASIC0.91□□□□□ -2.26
CKS1BP61024 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
CKS1BP61024 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
CKS1BP61024 RNU1-58P-201ENST00000362413 163 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 RNU6-271P-201ENST00000363858 105 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 RNU6-60P-201ENST00000364792 103 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 RNA5SP190-201ENST00000365222 118 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 SNORA26.9-201ENST00000391322 122 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 TOMM20P4-201ENST00000427861 435 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 AL590233.1-201ENST00000430017 456 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.9□□□□□ -2.27
CKS1BP61024 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.9□□□□□ -2.27
CKS1BP61024 RNU6-775P-201ENST00000459318 96 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 RPS26P55-201ENST00000471178 356 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.9□□□□□ -2.27
CKS1BP61024 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.9□□□□□ -2.27
CKS1BP61024 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.9□□□□□ -2.27
CKS1BP61024 RNU6-885P-201ENST00000516607 104 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.9□□□□□ -2.27
CKS1BP61024 AP005660.1-201ENST00000522972 293 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 RAB11AP2-201ENST00000545905 639 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 AC012414.6-201ENST00000568241 401 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 ADAM3B-201ENST00000569937 840 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
CKS1BP61024 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.9□□□□□ -2.27
CKS1BP61024 BBIP1P1-201ENST00000602999 279 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 AC080188.3-201ENST00000624842 748 ntBASIC0.9□□□□□ -2.27
CKS1BP61024 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.9□□□□□ -2.27
CKS1BP61024 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.9□□□□□ -2.27
CKS1BP61024 RNU6-657P-201ENST00000383904 107 ntBASIC0.89□□□□□ -2.27
CKS1BP61024 RNU2-28P-201ENST00000410457 189 ntBASIC0.89□□□□□ -2.27
CKS1BP61024 AL121882.1-201ENST00000422893 417 ntBASIC0.89□□□□□ -2.27
CKS1BP61024 CST2P1-201ENST00000425770 87 ntBASIC0.89□□□□□ -2.27
CKS1BP61024 RAC1P8-201ENST00000427086 527 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms