Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCNKAP51800 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCNKAP51800 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 RNU6-451P-201ENST00000362921 107 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 RNA5SP374-201ENST00000362939 125 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 Y_RNA.255-201ENST00000364581 97 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 RNU6-877P-201ENST00000383868 107 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 NDUFB4P5-201ENST00000415445 361 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 ATG3P1-201ENST00000419507 911 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCNKAP51800 MTND1P18-201ENST00000448191 573 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCNKAP51800 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 AC092798.1-201ENST00000458542 409 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 RPL27AP5-201ENST00000469428 449 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC104806.1-201ENST00000508720 308 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 Y_RNA.689-201ENST00000516589 107 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 RN7SKP219-201ENST00000516825 296 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 RNA5SP471-201ENST00000516971 106 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 AC134698.4-201ENST00000523451 826 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
CLCNKAP51800 MTCO3P24-201ENST00000572729 782 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 MIR4325-201ENST00000583049 90 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC008521.1-201ENST00000587471 187 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCNKAP51800 AL158032.1-201ENST00000605401 106 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC008945.2-201ENST00000606056 604 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC002553.4-201ENST00000616896 331 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 AC024940.5-201ENST00000622889 474 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 MTND5P42-201ENST00000637720 498 ntBASIC3.11□□□□□ -1.91
CLCNKAP51800 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLCNKAP51800 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLCNKAP51800 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCNKAP51800 AL354685.2-201ENST00000448218 1447 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC004520.1-201ENST00000608362 1413 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCNKAP51800 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCNKAP51800 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCNKAP51800 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLCNKAP51800 RNU6-552P-201ENST00000362869 119 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 RNY3P3-201ENST00000363816 102 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 Y_RNA.390-201ENST00000383932 102 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 MIR1290-201ENST00000408735 78 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 OR9R1P-201ENST00000412200 877 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 Z85995.1-201ENST00000415547 335 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC007919.1-201ENST00000429380 217 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 HMGB1P31-201ENST00000437242 427 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 MTND4P25-201ENST00000441039 533 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC006445.1-201ENST00000491925 405 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC116353.2-201ENST00000505332 712 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC098591.2-201ENST00000510152 315 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC105417.1-201ENST00000514691 285 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 RNU6-1178P-201ENST00000516674 107 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 RNU6-677P-201ENST00000516914 101 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 HIF1AP1-201ENST00000553642 175 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCNKAP51800 RMST_3.1-201ENST00000611651 109 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCNKAP51800 MIR3662-201ENST00000637030 95 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCNKAP51800 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
CLCNKAP51800 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 AC008568.2-201ENST00000623862 2313 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CLCNKAP51800 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 RNU6-817P-201ENST00000391083 104 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCNKAP51800 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCNKAP51800 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCNKAP51800 AL109913.1-201ENST00000421173 514 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 MTND4LP11-201ENST00000422184 280 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCNKAP51800 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCNKAP51800 RPL23AP69-201ENST00000431134 458 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 HMGB1P27-201ENST00000431429 603 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 AL591212.2-201ENST00000433923 257 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 CYCSP32-201ENST00000440548 321 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCNKAP51800 CBWD4P-201ENST00000445695 655 ntBASIC3.09□□□□□ -1.91
CLCNKAP51800 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms