Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PTPN9P43378 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN9P43378 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PTPN9P43378 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN9P43378 AL354685.2-201ENST00000448218 1447 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTPN9P43378 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTPN9P43378 MIR301A-201ENST00000385261 86 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 FAT1P1-201ENST00000406588 507 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 RNU6-373P-201ENST00000411247 98 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPN9P43378 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPN9P43378 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN9P43378 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN9P43378 AC006028.1-201ENST00000438379 402 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 AC104058.1-201ENST00000448028 297 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 RNU7-180P-201ENST00000459240 63 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 RN7SL807P-201ENST00000470923 297 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 KC877373.1-201ENST00000479066 408 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 AC012181.1-201ENST00000479895 423 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN9P43378 PRDX4P1-201ENST00000507189 574 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN9P43378 RNA5SP401-201ENST00000515920 127 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 RNU6-143P-201ENST00000516942 93 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 RNA5SP290-201ENST00000517133 127 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.28□□□□□ -1.88
PTPN9P43378 AC022690.1-201ENST00000526681 550 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 AL137161.1-201ENST00000532231 390 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 AC136601.2-201ENST00000604356 474 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 MIR15A-201ENST00000607334 83 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 MIR6076-201ENST00000617521 113 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 AC018692.3-201ENST00000623929 123 ntBASIC3.28□□□□□ -1.88
PTPN9P43378 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN9P43378 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.89
PTPN9P43378 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN9P43378 FAM35BP-202ENST00000497389 3337 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AC004520.1-201ENST00000608362 1413 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN9P43378 MTND4P14-201ENST00000435799 1354 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 MTND5P1-201ENST00000445440 1375 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN9P43378 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN9P43378 SNORD46.1-201ENST00000364139 104 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN9P43378 USP9YP6-201ENST00000413550 854 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AL160275.3-201ENST00000423876 471 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AC007919.1-201ENST00000429380 217 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN9P43378 AL512844.2-201ENST00000433990 593 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 WASF1P1-201ENST00000447560 1131 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 SSXP4-201ENST00000451349 245 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 RNA5SP310-201ENST00000459084 116 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AL135752.1-201ENST00000479477 471 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 RPS15AP34-201ENST00000487776 387 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.27□□□□□ -1.89
PTPN9P43378 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN9P43378 LRRC34P2-201ENST00000514850 553 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 RNU4-29P-201ENST00000515943 174 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 PSMA2P1-201ENST00000526365 646 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN9P43378 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN9P43378 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN9P43378 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN9P43378 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN9P43378 MIR5004-201ENST00000579078 107 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN9P43378 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AC002076.2-201ENST00000617362 122 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN9P43378 MIR622-201ENST00000638396 96 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN9P43378 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN9P43378 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.27□□□□□ -1.89
PTPN9P43378 AC007256.1-201ENST00000392253 2765 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
PTPN9P43378 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN9P43378 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTPN9P43378 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTPN9P43378 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 RNU6-217P-201ENST00000384164 104 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 MIR514A2-201ENST00000385131 88 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 MIR514A3-201ENST00000385132 88 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PTPN9P43378 CISD1P1-201ENST00000393907 327 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 RPS4XP3-201ENST00000398541 413 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 RNU6-1068P-201ENST00000410958 103 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 BTF3L4P3-201ENST00000418879 476 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 ARL5AP1-201ENST00000418991 388 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 GPM6BP2-201ENST00000432046 144 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 GPM6BP1-201ENST00000446387 144 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN9P43378 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.26□□□□□ -1.89
PTPN9P43378 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
PTPN9P43378 RNU6-358P-201ENST00000516564 75 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms