Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-270P-201ENST00000364131 105 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBEC1P41238 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBEC1P41238 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
APOBEC1P41238 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBEC1P41238 MIR888-201ENST00000401186 77 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 RNA5SP44-201ENST00000410446 133 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 RNU6-1025P-201ENST00000410629 104 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 OR9R1P-201ENST00000412200 877 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 EEF1A1P40-201ENST00000412883 573 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBEC1P41238 MTND1P23-201ENST00000416931 372 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 AC099548.1-201ENST00000421443 426 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 YME1L1P1-201ENST00000429435 297 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 MTND1P2-201ENST00000430604 821 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBEC1P41238 PRSS3P4-201ENST00000453323 162 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 SCARNA18-201ENST00000459004 134 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 RPS27P29-201ENST00000463110 252 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBEC1P41238 AC091885.1-201ENST00000506658 268 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBEC1P41238 PHBP14-201ENST00000512887 367 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBEC1P41238 SUB1P1-201ENST00000524415 382 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBEC1P41238 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
APOBEC1P41238 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBEC1P41238 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBEC1P41238 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBEC1P41238 AL138976.2-201ENST00000563989 694 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBEC1P41238 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.93□□□□□ -1.94
APOBEC1P41238 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBEC1P41238 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBEC1P41238 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBEC1P41238 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBEC1P41238 AC012314.7-201ENST00000619693 93 ntBASIC2.93□□□□□ -1.94
APOBEC1P41238 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBEC1P41238 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBEC1P41238 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBEC1P41238 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 RNU6-371P-201ENST00000364283 108 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 RNU4-66P-201ENST00000365199 138 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
APOBEC1P41238 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
APOBEC1P41238 RNU6-373P-201ENST00000411247 98 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.92□□□□□ -1.94
APOBEC1P41238 HMGN2P30-201ENST00000423237 256 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBEC1P41238 HIGD1AP11-201ENST00000438361 280 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 NFU1P2-201ENST00000448700 469 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 AC125238.1-201ENST00000448842 249 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 AC115115.1-201ENST00000449927 248 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 snoU13.28-201ENST00000459235 104 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 RPL31P58-201ENST00000469001 379 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
APOBEC1P41238 SNORA64.4-201ENST00000516632 81 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AC104027.1-201ENST00000521887 300 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AL163153.1-201ENST00000554223 283 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBEC1P41238 AL355598.1-201ENST00000604169 202 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 U6.42-201ENST00000618440 107 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 AC091903.1-201ENST00000624322 454 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 MIR3662-201ENST00000637030 95 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 OR4G1P-203ENST00000641984 1631 ntBASIC2.92□□□□□ -1.94
APOBEC1P41238 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBEC1P41238 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBEC1P41238 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
APOBEC1P41238 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBEC1P41238 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
APOBEC1P41238 RNU6-884P-201ENST00000363889 107 ntBASIC2.91□□□□□ -1.94
APOBEC1P41238 RNU6-715P-201ENST00000365204 103 ntBASIC2.91□□□□□ -1.94
APOBEC1P41238 RNU6-434P-201ENST00000384376 107 ntBASIC2.91□□□□□ -1.94
APOBEC1P41238 RNU6-393P-201ENST00000384475 107 ntBASIC2.91□□□□□ -1.94
APOBEC1P41238 RNU6-1127P-201ENST00000384580 107 ntBASIC2.91□□□□□ -1.94
APOBEC1P41238 MIR23B-201ENST00000384832 97 ntBASIC2.91□□□□□ -1.94
APOBEC1P41238 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms