Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP8P40818 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.16□□□□□ -1.9
USP8P40818 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.16□□□□□ -1.9
USP8P40818 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.16□□□□□ -1.9
USP8P40818 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.16□□□□□ -1.9
USP8P40818 AC007619.2-201ENST00000605743 379 ntBASIC3.16□□□□□ -1.9
USP8P40818 RPL23AP88-201ENST00000605759 454 ntBASIC3.16□□□□□ -1.9
USP8P40818 AC104458.1-201ENST00000608243 463 ntBASIC3.16□□□□□ -1.9
USP8P40818 AC096577.2-201ENST00000611455 153 ntBASIC3.16□□□□□ -1.9
USP8P40818 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
USP8P40818 AC010133.1-201ENST00000615809 842 ntBASIC3.16□□□□□ -1.9
USP8P40818 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP8P40818 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP8P40818 OR4G2P-202ENST00000641004 1759 ntBASIC3.15□□□□□ -1.9
USP8P40818 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
USP8P40818 RNU5A-1-201ENST00000362698 116 ntBASIC3.15□□□□□ -1.91
USP8P40818 RNU6-1284P-201ENST00000363701 100 ntBASIC3.15□□□□□ -1.91
USP8P40818 Y_RNA.295-201ENST00000364918 102 ntBASIC3.15□□□□□ -1.91
USP8P40818 SNORA70.4-201ENST00000365509 134 ntBASIC3.15□□□□□ -1.91
USP8P40818 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP8P40818 FO393413.1-201ENST00000402892 195 ntBASIC3.15□□□□□ -1.91
USP8P40818 AL139095.1-201ENST00000404326 391 ntBASIC3.15□□□□□ -1.91
USP8P40818 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.15□□□□□ -1.91
USP8P40818 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
USP8P40818 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USP8P40818 USP9YP6-201ENST00000413550 854 ntBASIC3.15□□□□□ -1.91
USP8P40818 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.15□□□□□ -1.91
USP8P40818 MTCYBP8-201ENST00000422855 651 ntBASIC3.15□□□□□ -1.91
USP8P40818 RAC1P6-201ENST00000423911 575 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC008850.1-201ENST00000427546 362 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.15□□□□□ -1.91
USP8P40818 GTF2IP20-201ENST00000431663 360 ntBASIC3.15□□□□□ -1.91
USP8P40818 MTCO2P3-201ENST00000442543 421 ntBASIC3.15□□□□□ -1.91
USP8P40818 RPS3AP12-201ENST00000443616 753 ntBASIC3.15□□□□□ -1.91
USP8P40818 DPPA3P1-201ENST00000448050 469 ntBASIC3.15□□□□□ -1.91
USP8P40818 RPL37P4-201ENST00000448908 268 ntBASIC3.15□□□□□ -1.91
USP8P40818 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.15□□□□□ -1.91
USP8P40818 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.15□□□□□ -1.91
USP8P40818 RNU7-63P-201ENST00000459054 62 ntBASIC3.15□□□□□ -1.91
USP8P40818 MRPS17P3-201ENST00000465453 385 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC116353.2-201ENST00000505332 712 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC009901.1-201ENST00000506703 541 ntBASIC3.15□□□□□ -1.91
USP8P40818 SCGB1D5P-201ENST00000515134 247 ntBASIC3.15□□□□□ -1.91
USP8P40818 RNU6-1092P-201ENST00000516955 87 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.15□□□□□ -1.91
USP8P40818 AC100870.1-201ENST00000522035 505 ntBASIC3.15□□□□□ -1.91
USP8P40818 PSMA2P1-201ENST00000526365 646 ntBASIC3.15□□□□□ -1.91
USP8P40818 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.15□□□□□ -1.91
USP8P40818 OR5AL2P-201ENST00000532185 920 ntBASIC3.15□□□□□ -1.91
USP8P40818 AL157687.1-201ENST00000554853 619 ntBASIC3.15□□□□□ -1.91
USP8P40818 MED28P6-201ENST00000558776 231 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC012493.2-201ENST00000595083 291 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.15□□□□□ -1.91
USP8P40818 SDR42E1P2-201ENST00000614861 481 ntBASIC3.15□□□□□ -1.91
USP8P40818 ATP5A1P2-202ENST00000616464 443 ntBASIC3.15□□□□□ -1.91
USP8P40818 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
USP8P40818 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.15□□□□□ -1.91
USP8P40818 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.15□□□□□ -1.91
USP8P40818 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.15□□□□□ -1.91
USP8P40818 MIR1321-201ENST00000637766 79 ntBASIC3.15□□□□□ -1.91
USP8P40818 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.15□□□□□ -1.91
USP8P40818 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.91
USP8P40818 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.15□□□□□ -1.91
USP8P40818 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.14□□□□□ -1.91
USP8P40818 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
USP8P40818 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP8P40818 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.14□□□□□ -1.91
USP8P40818 RNU6-1322P-201ENST00000364309 107 ntBASIC3.14□□□□□ -1.91
USP8P40818 RNU1-109P-201ENST00000383960 147 ntBASIC3.14□□□□□ -1.91
USP8P40818 SNORA24.1-201ENST00000384401 135 ntBASIC3.14□□□□□ -1.91
USP8P40818 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
USP8P40818 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
USP8P40818 UBE2D3P2-201ENST00000424409 445 ntBASIC3.14□□□□□ -1.91
USP8P40818 HMGB1P31-201ENST00000437242 427 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC016691.1-201ENST00000441321 413 ntBASIC3.14□□□□□ -1.91
USP8P40818 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
USP8P40818 AL162395.1-201ENST00000457882 422 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.14□□□□□ -1.91
USP8P40818 SNORD97-201ENST00000459187 142 ntBASIC3.14□□□□□ -1.91
USP8P40818 HSPE1P6-201ENST00000479457 291 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.14□□□□□ -1.91
USP8P40818 AC116562.3-201ENST00000506136 177 ntBASIC3.14□□□□□ -1.91
USP8P40818 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.14□□□□□ -1.91
USP8P40818 SNORD27.1-201ENST00000516319 72 ntBASIC3.14□□□□□ -1.91
USP8P40818 SNORA40.12-201ENST00000516329 111 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC068587.5-201ENST00000528506 175 ntBASIC3.14□□□□□ -1.91
USP8P40818 OR5B19P-201ENST00000531766 928 ntBASIC3.14□□□□□ -1.91
USP8P40818 AP002404.1-201ENST00000532005 451 ntBASIC3.14□□□□□ -1.91
USP8P40818 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.14□□□□□ -1.91
USP8P40818 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.14□□□□□ -1.91
USP8P40818 AC093012.1-202ENST00000549403 582 ntBASIC3.14□□□□□ -1.91
USP8P40818 HMGB1P6-201ENST00000569046 646 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC024619.4-201ENST00000580924 316 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.14□□□□□ -1.91
USP8P40818 AP000787.2-201ENST00000604432 568 ntBASIC3.14□□□□□ -1.91
USP8P40818 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.14□□□□□ -1.91
USP8P40818 AL162274.2-201ENST00000614406 332 ntBASIC3.14□□□□□ -1.91
USP8P40818 AL354950.2-201ENST00000617939 290 ntBASIC3.14□□□□□ -1.91
USP8P40818 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
USP8P40818 MIR3651-201ENST00000630427 90 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms