Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC135507.2-201ENST00000612443 309 ntBASIC3.55□□□□□ -1.84
HOXD12P35452 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD12P35452 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD12P35452 AC022336.2-201ENST00000568966 2538 ntBASIC3.55□□□□□ -1.84
HOXD12P35452 AL356274.2-201ENST00000624379 3752 ntBASIC3.55□□□□□ -1.84
HOXD12P35452 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD12P35452 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD12P35452 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HOXD12P35452 AL139276.1-201ENST00000311910 1001 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RNU4-66P-201ENST00000365199 138 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 CD24P4-201ENST00000382840 243 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RNU6-741P-201ENST00000383889 107 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 HLFP1-201ENST00000402375 499 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RN7SKP140-201ENST00000411196 284 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RNU6-387P-201ENST00000411331 105 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 OR6C66P-201ENST00000414917 930 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD12P35452 AC005300.1-201ENST00000428401 373 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXD12P35452 RPL23AP69-201ENST00000431134 458 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AC020550.1-201ENST00000447385 163 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AC010099.1-201ENST00000455434 375 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD12P35452 SNRPFP3-201ENST00000457792 225 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AP000852.1-201ENST00000472460 573 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RNA5SP208-201ENST00000516156 78 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RN7SKP258-201ENST00000517151 304 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 RNA5SP380-201ENST00000517190 98 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 MIR4325-201ENST00000583049 90 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AL158032.1-201ENST00000605401 106 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AL161629.2-201ENST00000615347 275 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 AC104985.2-201ENST00000620598 500 ntBASIC3.54□□□□□ -1.84
HOXD12P35452 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD12P35452 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD12P35452 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD12P35452 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
HOXD12P35452 RNU4-35P-201ENST00000362588 141 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 Y_RNA.72-201ENST00000362894 103 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD12P35452 RNU6-1009P-201ENST00000390996 107 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AL162578.1-201ENST00000406202 378 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 RNA5SP293-201ENST00000410527 113 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 RPL7P46-201ENST00000425129 740 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 SRIP2-201ENST00000428470 166 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 RPL7P5-201ENST00000471472 736 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 RPL21P99-201ENST00000480369 423 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 TTC39CP1-201ENST00000512513 755 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 RNU6-123P-201ENST00000516163 102 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 RANP3-201ENST00000530970 276 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AC023050.3-201ENST00000541142 333 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD12P35452 AC008521.1-201ENST00000587471 187 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AC067852.3-201ENST00000589177 561 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 AC104763.2-201ENST00000604179 382 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 NUTF2P8-201ENST00000604593 363 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AL670379.4-201ENST00000605279 254 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AL365204.3-201ENST00000612448 685 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD12P35452 AC099654.5-201ENST00000636479 350 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 AL513302.2-201ENST00000562313 1842 ntBASIC3.53□□□□□ -1.84
HOXD12P35452 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HOXD12P35452 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD12P35452 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXD12P35452 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.53□□□□□ -1.85
HOXD12P35452 AC091564.4-201ENST00000533934 2194 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD12P35452 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-797P-201ENST00000363101 109 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 Y_RNA.231-201ENST00000364358 102 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU4-20P-201ENST00000365601 151 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-38P-201ENST00000384085 107 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-767P-201ENST00000384132 107 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-1035P-201ENST00000384477 107 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-14P-201ENST00000384630 106 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 MIR128-1-201ENST00000384921 82 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 MIR325-201ENST00000385260 98 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD12P35452 HSPE1P8-201ENST00000406997 288 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 Y_RNA.615-201ENST00000410769 117 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 Z85995.1-201ENST00000415547 335 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 ERLEC1P1-201ENST00000433806 578 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-333P-201ENST00000459117 107 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU7-180P-201ENST00000459240 63 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC093663.1-201ENST00000497190 394 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms