Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC104472.2-201ENST00000469035 601 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 RPL23AP11-201ENST00000475260 469 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 EIF4EP3-201ENST00000498782 656 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA11P31270 AC091885.1-201ENST00000506658 268 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC114797.1-201ENST00000514003 728 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA11P31270 RN7SKP60-201ENST00000516985 239 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC100870.1-201ENST00000522035 505 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AP002404.1-201ENST00000532005 451 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HOXA11P31270 AC023050.3-201ENST00000541142 333 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 BNIP3P6-201ENST00000549284 499 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA11P31270 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA11P31270 MIR4293-201ENST00000584305 78 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 MIR4424-201ENST00000585257 86 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AL022099.1-201ENST00000604551 712 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AL121992.2-201ENST00000606262 256 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 uc_338.11-201ENST00000619132 160 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC091903.1-201ENST00000624322 454 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
HOXA11P31270 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA11P31270 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA11P31270 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA11P31270 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA11P31270 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA11P31270 RNU5E-8P-201ENST00000363502 116 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 RNU6-1155P-201ENST00000363554 107 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 MIR493-201ENST00000385254 89 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 RNU6-510P-201ENST00000391239 108 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AL591416.1-201ENST00000404015 867 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AL162578.1-201ENST00000406202 378 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 NCOR1P3-201ENST00000420479 303 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA11P31270 RPL35AP12-201ENST00000425362 338 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXA11P31270 OR4K11P-201ENST00000431829 904 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA11P31270 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 MTATP6P16-201ENST00000434543 526 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 RPL35AP22-201ENST00000436855 335 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA11P31270 AL049873.1-201ENST00000480540 376 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 VN1R104P-201ENST00000505115 1009 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 SNORA19.2-201ENST00000516013 114 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AC087241.2-201ENST00000535801 324 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AC125611.2-201ENST00000551907 647 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 OR4K8P-201ENST00000578842 1048 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 AL033523.1-201ENST00000605153 153 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXA11P31270 AL603758.1-201ENST00000618654 241 ntBASIC3.38□□□□□ -1.87
HOXA11P31270 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXA11P31270 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXA11P31270 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA11P31270 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA11P31270 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA11P31270 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HOXA11P31270 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA11P31270 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA11P31270 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA11P31270 Y_RNA.231-201ENST00000364358 102 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU6-1078P-201ENST00000364522 103 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 SNORA14A-201ENST00000364773 135 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU1-140P-201ENST00000365040 165 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 Y_RNA.356-201ENST00000365475 113 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 Y_RNA.460-201ENST00000384255 102 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HOXA11P31270 SNORD67-201ENST00000390833 111 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU6-332P-201ENST00000391193 108 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AL122016.1-201ENST00000403365 367 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RPL5P18-201ENST00000406671 891 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA11P31270 RNU7-182P-201ENST00000459009 62 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 MRPS17P3-201ENST00000465453 385 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC112206.3-201ENST00000514578 389 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA11P31270 RNU6-277P-201ENST00000516272 106 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU7-51P-201ENST00000516560 62 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 Y_RNA.691-201ENST00000516611 103 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 Y_RNA.701-201ENST00000516812 110 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU6-1314P-201ENST00000517139 104 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC105029.1-201ENST00000520250 669 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 FAM60DP-201ENST00000524174 632 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC128657.1-201ENST00000549459 145 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 PSMA3P-201ENST00000555485 635 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXA11P31270 MIR4795-201ENST00000584182 89 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA11P31270 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA11P31270 AL137843.1-201ENST00000605078 385 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 RNU6-89P-201ENST00000606519 100 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC009248.2-201ENST00000619826 254 ntBASIC3.37□□□□□ -1.87
HOXA11P31270 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms