Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPL37P21-201ENST00000435890 276 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL603825.1-201ENST00000438481 80 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 MTND1P26-201ENST00000440488 538 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXA9P31269 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 ZNF114P1-201ENST00000453500 292 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXA9P31269 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXA9P31269 MTCO2P6-201ENST00000463134 685 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA9P31269 BZW1P2-201ENST00000473537 826 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXA9P31269 AC116337.1-201ENST00000509680 687 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 TTC39CP1-201ENST00000512513 755 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.23□□□□□ -2.05
HOXA9P31269 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXA9P31269 AL133153.1-201ENST00000557756 303 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.23□□□□□ -2.05
HOXA9P31269 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXA9P31269 AC104010.1-201ENST00000616889 150 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 OR5H6-203ENST00000642105 978 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL445523.1-201ENST00000451184 1362 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXA9P31269 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXA9P31269 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXA9P31269 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HOXA9P31269 Y_RNA.169-201ENST00000363745 96 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXA9P31269 RNU6-432P-201ENST00000384196 109 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 UBE2FP1-201ENST00000416536 447 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 MORF4L1P6-201ENST00000418771 268 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.22□□□□□ -2.05
HOXA9P31269 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXA9P31269 RPS27AP14-201ENST00000422868 454 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AL365203.2-201ENST00000423444 196 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC008850.1-201ENST00000427546 362 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AL356867.1-201ENST00000429623 299 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXA9P31269 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 AL049734.2-201ENST00000441066 616 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXA9P31269 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 HMGN2P23-201ENST00000456759 269 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 RPL30P6-201ENST00000475925 342 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 RPL38P4-201ENST00000502376 214 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXA9P31269 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.22□□□□□ -2.05
HOXA9P31269 AC116347.2-201ENST00000514912 523 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXA9P31269 RNU6-1003P-201ENST00000517099 105 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXA9P31269 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXA9P31269 AC109446.2-201ENST00000567872 497 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC068135.2-201ENST00000569293 1028 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 ROCK1P1-201ENST00000573767 549 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 NIFKP6-201ENST00000598115 845 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 AC122133.1-201ENST00000613964 233 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 MIR7844-201ENST00000616161 122 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXA9P31269 DDX10P1-201ENST00000448545 1933 ntBASIC2.22□□□□□ -2.05
HOXA9P31269 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HOXA9P31269 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXA9P31269 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HOXA9P31269 RNU6-501P-201ENST00000364072 100 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 RN7SKP226-201ENST00000364912 300 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 OR5H15-201ENST00000383696 930 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AL031577.2-201ENST00000404133 280 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXA9P31269 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXA9P31269 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXA9P31269 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXA9P31269 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXA9P31269 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXA9P31269 TAAR7P-201ENST00000436141 242 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 RPL35AP22-201ENST00000436855 335 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 IPO7P1-201ENST00000442031 636 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXA9P31269 MTATP6P30-201ENST00000443540 664 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AC007677.1-201ENST00000445757 515 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AL118520.1-201ENST00000450770 291 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 KATNBL1P6-201ENST00000453433 915 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXA9P31269 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXA9P31269 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.21□□□□□ -2.06
HOXA9P31269 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXA9P31269 MTND1P22-201ENST00000510572 951 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXA9P31269 SCARNA15.2-201ENST00000516409 127 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 RNU6-1256P-201ENST00000516539 103 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 RNU6-548P-201ENST00000517083 115 ntBASIC2.21□□□□□ -2.06
HOXA9P31269 NRON-201ENST00000517270 370 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms