Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.21□□□□□ -1.9
TM4SF1P30408 HMGB1P9-201ENST00000429856 646 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.21□□□□□ -1.9
TM4SF1P30408 RPL31P35-201ENST00000431058 377 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.21□□□□□ -1.9
TM4SF1P30408 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.21□□□□□ -1.9
TM4SF1P30408 AC011816.1-201ENST00000441346 546 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.21□□□□□ -1.9
TM4SF1P30408 CECR9-201ENST00000453421 199 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.21□□□□□ -1.9
TM4SF1P30408 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 RN7SL636P-201ENST00000497504 294 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 AC114786.4-201ENST00000508771 728 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
TM4SF1P30408 AC117522.2-201ENST00000510049 657 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TM4SF1P30408 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.21□□□□□ -1.9
TM4SF1P30408 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TM4SF1P30408 MIR3186-201ENST00000577404 85 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 MIR3913-1-201ENST00000577744 102 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 MIR4635-201ENST00000583759 79 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.21□□□□□ -1.9
TM4SF1P30408 AP003399.1-201ENST00000637534 361 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TM4SF1P30408 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.9
TM4SF1P30408 AC007336.1-201ENST00000576365 3828 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TM4SF1P30408 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TM4SF1P30408 RNU6-884P-201ENST00000363889 107 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.2□□□□□ -1.9
TM4SF1P30408 RNU6-39P-201ENST00000384344 107 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.2□□□□□ -1.9
TM4SF1P30408 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 NDUFS5P4-201ENST00000412983 318 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 RPL26P27-201ENST00000414397 437 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 USP9YP20-201ENST00000419224 558 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 PIGFP2-201ENST00000421400 651 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 ISCA1P1-201ENST00000426679 387 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC093106.2-201ENST00000428212 385 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC133104.1-201ENST00000429100 218 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 RPL23AP30-201ENST00000432419 501 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 MTCO1P19-201ENST00000443487 500 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 FABP5P15-201ENST00000453566 214 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC022364.2-201ENST00000457963 554 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 RPS29P12-201ENST00000460178 152 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.2□□□□□ -1.9
TM4SF1P30408 AC010493.1-201ENST00000513479 292 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.2□□□□□ -1.9
TM4SF1P30408 SUB1P1-201ENST00000524415 382 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.2□□□□□ -1.9
TM4SF1P30408 NACAP3-201ENST00000552100 481 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AL391261.3-201ENST00000557194 520 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC012213.3-201ENST00000577199 777 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 MIR3167-201ENST00000579623 85 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 MIR3611-201ENST00000584484 83 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.2□□□□□ -1.9
TM4SF1P30408 AC007938.3-201ENST00000604965 623 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 DUSP12P1-201ENST00000612874 516 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC011939.3-201ENST00000613686 466 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AC138649.3-201ENST00000622154 254 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 AL512643.1-201ENST00000635735 524 ntBASIC3.2□□□□□ -1.9
TM4SF1P30408 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TM4SF1P30408 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 RNU6-1097P-201ENST00000363586 107 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AL135786.1-201ENST00000415892 214 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 MTND3P17-201ENST00000416968 344 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 BX295541.1-201ENST00000417774 250 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 AL353706.1-201ENST00000436728 494 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.19□□□□□ -1.9
TM4SF1P30408 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.19□□□□□ -1.9
TM4SF1P30408 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF1P30408 ADI1P3-201ENST00000549509 470 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF1P30408 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AL391840.1-201ENST00000571144 367 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 AC098848.2-201ENST00000588023 330 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF1P30408 AC022893.3-201ENST00000607665 437 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 AC005332.10-201ENST00000612725 619 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.19□□□□□ -1.9
TM4SF1P30408 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
TM4SF1P30408 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF1P30408 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TM4SF1P30408 RNU6-179P-201ENST00000363350 107 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 EI24P2-201ENST00000397776 1076 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 AL359511.1-201ENST00000402970 211 ntBASIC3.18□□□□□ -1.9
TM4SF1P30408 RNU6-387P-201ENST00000411331 105 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms