Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL6A2P12110 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.07□□□□□ -1.76
COL6A2P12110 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL6A2P12110 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.07□□□□□ -1.76
COL6A2P12110 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 MIR423-201ENST00000362201 94 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 RNU6-384P-201ENST00000364900 104 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 AL592148.1-201ENST00000413568 445 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.06□□□□□ -1.76
COL6A2P12110 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 GSTA11P-201ENST00000452866 669 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 ANP32BP2-201ENST00000454525 545 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 AC068781.1-201ENST00000488231 618 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.06□□□□□ -1.76
COL6A2P12110 AC099522.1-202ENST00000514718 367 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 RNU6-475P-201ENST00000516073 104 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 GNRHR2P1-201ENST00000555315 631 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.06□□□□□ -1.76
COL6A2P12110 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL6A2P12110 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.06□□□□□ -1.76
COL6A2P12110 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.06□□□□□ -1.76
COL6A2P12110 AC119674.1-207ENST00000641355 633 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.06□□□□□ -1.76
COL6A2P12110 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
COL6A2P12110 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.06□□□□□ -1.76
COL6A2P12110 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL6A2P12110 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL6A2P12110 AL359693.1-201ENST00000614959 2407 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 IPO8P1-201ENST00000455509 3109 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
COL6A2P12110 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
COL6A2P12110 U3.22-201ENST00000391120 215 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.05□□□□□ -1.76
COL6A2P12110 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 RSL24D1P6-201ENST00000426934 401 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AC087650.1-201ENST00000431445 468 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AC099799.1-201ENST00000439809 192 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AC006011.1-201ENST00000442758 349 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 RPL23AP24-201ENST00000458203 385 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.05□□□□□ -1.76
COL6A2P12110 AC069499.1-201ENST00000489433 509 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AC018437.1-201ENST00000492214 406 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 RPL29P14-201ENST00000495837 428 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.05□□□□□ -1.76
COL6A2P12110 COX6CP5-201ENST00000527162 228 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.05□□□□□ -1.76
COL6A2P12110 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.05□□□□□ -1.76
COL6A2P12110 AC022655.2-201ENST00000577280 318 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 MIR4503-201ENST00000582187 83 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 MIR4715-201ENST00000584117 79 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.05□□□□□ -1.76
COL6A2P12110 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 MIR6758-201ENST00000620653 63 ntBASIC4.05□□□□□ -1.76
COL6A2P12110 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.05□□□□□ -1.76
COL6A2P12110 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
COL6A2P12110 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL6A2P12110 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.05□□□□□ -1.76
COL6A2P12110 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
COL6A2P12110 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 TNPO1P3-201ENST00000436471 2662 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 RNU6-741P-201ENST00000383889 107 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 Y_RNA.527-201ENST00000384573 102 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 MIR1251-201ENST00000408552 70 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 HMGB3P2-201ENST00000411913 584 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.04□□□□□ -1.76
COL6A2P12110 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.04□□□□□ -1.76
COL6A2P12110 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.04□□□□□ -1.76
COL6A2P12110 AC078918.1-201ENST00000498515 228 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.04□□□□□ -1.76
COL6A2P12110 AC005921.1-201ENST00000510589 286 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 AC113155.1-201ENST00000511141 769 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 RNU6-120P-201ENST00000516077 103 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 AC007991.1-201ENST00000522680 631 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.04□□□□□ -1.76
COL6A2P12110 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.04□□□□□ -1.76
COL6A2P12110 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.04□□□□□ -1.76
COL6A2P12110 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
COL6A2P12110 AC004817.2-201ENST00000561794 651 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms