Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 AL159153.1-201ENST00000619688 317 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 AC012442.3-202ENST00000636742 206 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 Z82217.1-201ENST00000625157 8149 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-1159P-201ENST00000362933 107 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AL592045.1-201ENST00000429867 352 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AL133396.1-201ENST00000432048 687 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 RNU7-169P-201ENST00000459456 61 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 RNU5B-3P-201ENST00000516601 115 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 RNA5SP471-201ENST00000516971 106 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AC005255.1-201ENST00000593748 216 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 SNORD91B-202ENST00000608459 222 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 AP001282.2-201ENST00000616149 309 ntBASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSB-PGBD3P0DP91 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CSB-PGBD3P0DP91 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.52
CSB-PGBD3P0DP91 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.59□□□□□ -1.52
CSB-PGBD3P0DP91 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CSB-PGBD3P0DP91 AC000123.3-201ENST00000624029 4975 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-1303P-201ENST00000364841 107 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 Y_RNA.480-201ENST00000384364 102 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 MIR449B-201ENST00000384995 97 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC063979.1-201ENST00000415539 377 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AL691449.1-201ENST00000426570 421 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 MYL8P-204ENST00000431574 518 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC073063.1-201ENST00000434352 607 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 HSPD1P21-201ENST00000436541 245 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 NDUFB1P2-201ENST00000449477 176 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 snoU13.4-201ENST00000458916 104 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 RPL31P60-201ENST00000478450 367 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC022868.1-201ENST00000517767 391 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 MIR548AC-201ENST00000585049 88 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC002044.1-201ENST00000606707 158 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC069200.1-201ENST00000609511 323 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC107294.1-201ENST00000609524 467 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC127459.3-201ENST00000624328 466 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 Z99571.1-201ENST00000636677 394 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 AC132825.6-201ENST00000638861 357 ntBASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSB-PGBD3P0DP91 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC007390.2-201ENST00000606229 3803 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 NEAT1-202ENST00000501122 22743 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 RNA5SP124-201ENST00000362739 110 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-512P-201ENST00000364438 103 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 MIR578-201ENST00000384828 96 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 MIR548H3-201ENST00000408771 118 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 MIR1911-201ENST00000410783 80 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 RNU2-71P-201ENST00000411395 189 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 UBE2V1P4-201ENST00000425374 344 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC004383.1-201ENST00000438135 289 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 RPS3AP46-201ENST00000448352 682 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC098869.1-201ENST00000481627 292 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AL359273.1-201ENST00000510918 627 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-143P-201ENST00000516942 93 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 CBX3P8-201ENST00000532412 525 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC006064.5-201ENST00000541782 248 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 MIR3921-201ENST00000577308 85 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms