Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 snoU109.4-201ENST00000458953 143 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 MRPS17P3-201ENST00000465453 385 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 GMFBP1-201ENST00000467831 427 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC126389.1-201ENST00000477436 290 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 SNORD27.1-201ENST00000516319 72 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 RNU2-10P-201ENST00000516375 211 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 BTF3P12-201ENST00000519620 469 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC6P09630 OR5AL2P-201ENST00000532185 920 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXC6P09630 ZNF192P1-203ENST00000565888 810 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 MIR4775-201ENST00000581168 75 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 AL355812.1-201ENST00000603215 216 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC6P09630 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC6P09630 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC6P09630 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
HOXC6P09630 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC6P09630 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC6P09630 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC6P09630 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HOXC6P09630 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC6P09630 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC6P09630 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC6P09630 HSPE1P11-201ENST00000339579 310 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 SNORD56.3-201ENST00000363507 71 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 Y_RNA.157-201ENST00000363638 102 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RNU4-20P-201ENST00000365601 151 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC6P09630 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC6P09630 RNU6-637P-201ENST00000384050 107 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 MIR135A2-201ENST00000384854 100 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 MT-TD-201ENST00000387419 68 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AL356432.1-201ENST00000405809 419 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RNU2-39P-201ENST00000410604 198 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RNU6-373P-201ENST00000411247 98 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC007390.1-201ENST00000415722 356 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 MED13P1-201ENST00000428342 171 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC005094.1-201ENST00000440420 368 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AL118520.1-201ENST00000450770 291 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 MTND1P9-201ENST00000453775 944 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AL162395.1-201ENST00000457882 422 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RN7SL330P-201ENST00000469709 307 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC6P09630 AC078918.1-201ENST00000498515 228 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC116562.3-201ENST00000506136 177 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC117522.3-201ENST00000507974 584 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RNU7-51P-201ENST00000516560 62 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 SNORA64.4-201ENST00000516632 81 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 RN7SKP219-201ENST00000516825 296 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC6P09630 AC068587.5-201ENST00000528506 175 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AP005435.4-201ENST00000529514 284 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 HPRT1P3-201ENST00000539521 576 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC093027.1-201ENST00000546698 429 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC126177.3-201ENST00000551839 688 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC6P09630 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC6P09630 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC6P09630 AC024153.1-201ENST00000603103 365 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC087045.1-201ENST00000605856 382 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 HMGN2P28-201ENST00000606102 262 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC010133.1-201ENST00000615809 842 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC009233.1-201ENST00000616477 371 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC007742.2-201ENST00000618226 398 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 AC048347.1-201ENST00000624621 427 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HOXC6P09630 MTND4P35-201ENST00000604257 1375 ntBASIC3.35□□□□□ -1.87
HOXC6P09630 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC6P09630 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC6P09630 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 Y_RNA.58-201ENST00000362807 102 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 RNU6-1249P-201ENST00000363237 111 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 Y_RNA.154-201ENST00000363624 102 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 RNY3P1-201ENST00000365085 102 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 SNORA9.2-201ENST00000365361 133 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 RNY3-201ENST00000365484 102 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 RNU5E-6P-201ENST00000365574 115 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 Y_RNA.490-201ENST00000384413 102 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 SNORD37.1-201ENST00000390968 65 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC6P09630 AL136372.1-201ENST00000403060 228 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 SSXP9-201ENST00000417503 292 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC6P09630 SRIP2-201ENST00000428470 166 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 RPL7P12-201ENST00000446719 750 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC6P09630 TTC39CP1-201ENST00000512513 755 ntBASIC3.34□□□□□ -1.87
HOXC6P09630 AC105417.1-201ENST00000514691 285 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms