Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RNU6-566P-201ENST00000516790 107 ntBASIC4.34□□□□□ -1.71
APPP05067 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.34□□□□□ -1.71
APPP05067 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.34□□□□□ -1.71
APPP05067 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.34□□□□□ -1.71
APPP05067 SNORD84-203ENST00000584275 78 ntBASIC4.34□□□□□ -1.71
APPP05067 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.34□□□□□ -1.71
APPP05067 AC113139.1-201ENST00000605049 239 ntBASIC4.34□□□□□ -1.71
APPP05067 AC084781.2-201ENST00000615568 161 ntBASIC4.34□□□□□ -1.71
APPP05067 AC112200.1-201ENST00000625015 234 ntBASIC4.34□□□□□ -1.71
APPP05067 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.34□□□□□ -1.71
APPP05067 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.34□□□□□ -1.71
APPP05067 AC007656.2-201ENST00000624902 4547 ntBASIC4.34□□□□□ -1.71
APPP05067 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
APPP05067 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
APPP05067 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
APPP05067 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
APPP05067 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
APPP05067 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
APPP05067 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
APPP05067 SNORD3E-201ENST00000362899 217 ntBASIC4.33□□□□□ -1.72
APPP05067 SNORD113-7-201ENST00000363762 77 ntBASIC4.33□□□□□ -1.72
APPP05067 RNU6-82P-201ENST00000363970 107 ntBASIC4.33□□□□□ -1.72
APPP05067 XGY1-201ENST00000381172 446 ntBASIC4.33□□□□□ -1.72
APPP05067 RNU6-45P-201ENST00000384471 107 ntBASIC4.33□□□□□ -1.72
APPP05067 Y_RNA.579-201ENST00000390939 94 ntBASIC4.33□□□□□ -1.72
APPP05067 HMGN2P8-201ENST00000391458 268 ntBASIC4.33□□□□□ -1.72
APPP05067 EIF4E2P1-201ENST00000393781 255 ntBASIC4.33□□□□□ -1.72
APPP05067 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.33□□□□□ -1.72
APPP05067 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.33□□□□□ -1.72
APPP05067 RPS15AP6-201ENST00000420703 385 ntBASIC4.33□□□□□ -1.72
APPP05067 AF228730.4-201ENST00000421457 183 ntBASIC4.33□□□□□ -1.72
APPP05067 AC007919.1-201ENST00000429380 217 ntBASIC4.33□□□□□ -1.72
APPP05067 AC091286.1-201ENST00000431233 461 ntBASIC4.33□□□□□ -1.72
APPP05067 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.33□□□□□ -1.72
APPP05067 RNU7-167P-201ENST00000459160 62 ntBASIC4.33□□□□□ -1.72
APPP05067 SNORD19B-201ENST00000459623 84 ntBASIC4.33□□□□□ -1.72
APPP05067 APOOP4-201ENST00000513530 597 ntBASIC4.33□□□□□ -1.72
APPP05067 RNU6-927P-201ENST00000516199 100 ntBASIC4.33□□□□□ -1.72
APPP05067 RN7SKP83-201ENST00000516512 178 ntBASIC4.33□□□□□ -1.72
APPP05067 RNU6-1213P-201ENST00000517075 94 ntBASIC4.33□□□□□ -1.72
APPP05067 RN7SKP289-201ENST00000517244 295 ntBASIC4.33□□□□□ -1.72
APPP05067 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.33□□□□□ -1.72
APPP05067 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.33□□□□□ -1.72
APPP05067 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.33□□□□□ -1.72
APPP05067 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.33□□□□□ -1.72
APPP05067 MIR4790-201ENST00000577799 79 ntBASIC4.33□□□□□ -1.72
APPP05067 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.33□□□□□ -1.72
APPP05067 AL161798.1-201ENST00000604630 131 ntBASIC4.33□□□□□ -1.72
APPP05067 AC006077.1-201ENST00000604746 343 ntBASIC4.33□□□□□ -1.72
APPP05067 AC034102.8-201ENST00000615146 484 ntBASIC4.33□□□□□ -1.72
APPP05067 AL355365.1-201ENST00000616480 294 ntBASIC4.33□□□□□ -1.72
APPP05067 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.33□□□□□ -1.72
APPP05067 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.33□□□□□ -1.72
APPP05067 AL512643.1-201ENST00000635735 524 ntBASIC4.33□□□□□ -1.72
APPP05067 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
APPP05067 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
APPP05067 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
APPP05067 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
APPP05067 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APPP05067 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APPP05067 SNORA48.8-201ENST00000391324 134 ntBASIC4.32□□□□□ -1.72
APPP05067 AC063979.1-201ENST00000415539 377 ntBASIC4.32□□□□□ -1.72
APPP05067 RPLP0P7-201ENST00000416050 667 ntBASIC4.32□□□□□ -1.72
APPP05067 ARL5AP1-201ENST00000418991 388 ntBASIC4.32□□□□□ -1.72
APPP05067 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.32□□□□□ -1.72
APPP05067 RPL7P37-201ENST00000425095 738 ntBASIC4.32□□□□□ -1.72
APPP05067 SKA2P1-201ENST00000425592 390 ntBASIC4.32□□□□□ -1.72
APPP05067 HMGB1P27-201ENST00000431429 603 ntBASIC4.32□□□□□ -1.72
APPP05067 RNU6-953P-201ENST00000459154 107 ntBASIC4.32□□□□□ -1.72
APPP05067 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.32□□□□□ -1.72
APPP05067 AC106707.2-201ENST00000484182 374 ntBASIC4.32□□□□□ -1.72
APPP05067 AC022493.1-201ENST00000492984 337 ntBASIC4.32□□□□□ -1.72
APPP05067 MTND5P5-201ENST00000503764 376 ntBASIC4.32□□□□□ -1.72
APPP05067 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.32□□□□□ -1.72
APPP05067 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.32□□□□□ -1.72
APPP05067 RN7SKP24-201ENST00000515888 284 ntBASIC4.32□□□□□ -1.72
APPP05067 SNORA14.1-201ENST00000516113 141 ntBASIC4.32□□□□□ -1.72
APPP05067 SNORA31.8-201ENST00000516327 108 ntBASIC4.32□□□□□ -1.72
APPP05067 RNU6-1332P-201ENST00000516666 104 ntBASIC4.32□□□□□ -1.72
APPP05067 RNA5SP454-201ENST00000517231 127 ntBASIC4.32□□□□□ -1.72
APPP05067 AC026403.1-201ENST00000518938 295 ntBASIC4.32□□□□□ -1.72
APPP05067 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.32□□□□□ -1.72
APPP05067 HMGB1P14-201ENST00000557424 591 ntBASIC4.32□□□□□ -1.72
APPP05067 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.32□□□□□ -1.72
APPP05067 AC138761.3-201ENST00000579993 334 ntBASIC4.32□□□□□ -1.72
APPP05067 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.32□□□□□ -1.72
APPP05067 U2.17-201ENST00000611454 95 ntBASIC4.32□□□□□ -1.72
APPP05067 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
APPP05067 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.32□□□□□ -1.72
APPP05067 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
APPP05067 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.32□□□□□ -1.72
APPP05067 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
APPP05067 AC007496.3-201ENST00000624987 3443 ntBASIC4.32□□□□□ -1.72
APPP05067 MAPK10-362ENST00000641864 4484 ntBASIC4.32□□□□□ -1.72
APPP05067 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.32□□□□□ -1.72
APPP05067 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.32□□□□□ -1.72
APPP05067 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.32□□□□□ -1.72
APPP05067 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.32□□□□□ -1.72
APPP05067 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.31□□□□□ -1.72
APPP05067 RNA5SP295-201ENST00000362655 121 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms