Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFAP04085 SRP72P2-201ENST00000344851 1979 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFAP04085 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PDGFAP04085 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFAP04085 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDGFAP04085 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFAP04085 AL353743.1-202ENST00000431724 1695 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFAP04085 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFAP04085 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDGFAP04085 AL450345.1-202ENST00000605741 3881 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RNU6-222P-201ENST00000362438 107 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RNA5SP189-201ENST00000364920 115 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RN7SKP153-201ENST00000365026 316 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RNU1-73P-201ENST00000383971 164 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RNU6-843P-201ENST00000384454 104 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 MIR153-2-201ENST00000385225 87 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 U3.22-201ENST00000391120 215 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 Y_RNA.602-201ENST00000410535 92 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RNU2-14P-201ENST00000411053 191 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RPS20P14-201ENST00000412545 360 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFAP04085 RPL23AP14-201ENST00000468281 468 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 AC022133.1-201ENST00000490961 571 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 AC005921.1-201ENST00000510589 286 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 RNA5SP392-201ENST00000516905 112 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 AL137100.2-201ENST00000555786 315 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 AC023824.2-201ENST00000566185 400 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 MIR4715-201ENST00000584117 79 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFAP04085 AC073657.2-201ENST00000605661 303 ntBASIC4.57□□□□□ -1.68
PDGFAP04085 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFAP04085 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFAP04085 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PDGFAP04085 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFAP04085 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFAP04085 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDGFAP04085 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
PDGFAP04085 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDGFAP04085 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 Y_RNA.16-201ENST00000362421 102 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 RNU6-942P-201ENST00000363002 107 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 RNU6-778P-201ENST00000363269 103 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 SNORD113-8-201ENST00000363497 74 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 Y_RNA.277-201ENST00000364754 102 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 RNA5SP479-201ENST00000364858 117 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 Y_RNA.297-201ENST00000364950 91 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
PDGFAP04085 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 RNU6-142P-201ENST00000384019 107 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 Y_RNA.541-201ENST00000384640 113 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 MIR32-201ENST00000384965 70 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 MIR298-201ENST00000401212 88 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 MIR548M-201ENST00000408260 86 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 RN7SKP106-201ENST00000410832 272 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AL445305.1-201ENST00000432577 575 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AC005154.2-201ENST00000438110 379 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AC098831.1-201ENST00000440661 216 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AC243964.1-201ENST00000441814 261 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFAP04085 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFAP04085 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFAP04085 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFAP04085 RPL23AP56-201ENST00000460778 453 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 RNA5SP468-201ENST00000516782 93 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AC074050.1-201ENST00000563247 211 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFAP04085 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFAP04085 RN7SL690P-201ENST00000582087 240 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AL590392.1-201ENST00000604960 446 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 MIR6853-201ENST00000619642 74 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDGFAP04085 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 SALL4P2-201ENST00000423288 2910 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 FAM35BP-202ENST00000497389 3337 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFAP04085 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFAP04085 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 TLK1P1-201ENST00000456760 2440 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 AL022322.2-201ENST00000624072 20397 ntBASIC4.56□□□□□ -1.68
PDGFAP04085 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFAP04085 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.56□□□□□ -1.68
PDGFAP04085 SCARNA15-201ENST00000607520 4325 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFAP04085 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDGFAP04085 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDGFAP04085 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDGFAP04085 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFAP04085 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFAP04085 MAPK10-286ENST00000641208 8747 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFAP04085 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.55□□□□□ -1.68
PDGFAP04085 RNU6-937P-201ENST00000384325 106 ntBASIC4.55□□□□□ -1.68
PDGFAP04085 SNORA70.10-201ENST00000384515 134 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms