Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A1P02462 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
COL4A1P02462 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 RNU6-583P-201ENST00000516012 92 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A1P02462 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.39□□□□□ -2.19
COL4A1P02462 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A1P02462 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A1P02462 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A1P02462 MIR4509-3-201ENST00000578671 94 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 COX6CP3-201ENST00000580869 223 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC005730.3-201ENST00000583067 366 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 MIR4509-2-201ENST00000583920 94 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC015688.2-201ENST00000584523 262 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AL161629.2-201ENST00000615347 275 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 MIR4509-1-201ENST00000618224 94 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC110079.1-202ENST00000635213 138 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COL4A1P02462 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
COL4A1P02462 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.38□□□□□ -2.19
COL4A1P02462 RNU6-1122P-201ENST00000384449 107 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 Y_RNA.548-201ENST00000384656 105 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 MIR135A2-201ENST00000384854 100 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AC234781.2-201ENST00000426370 994 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.38□□□□□ -2.19
COL4A1P02462 UBE2FP3-201ENST00000436366 524 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
COL4A1P02462 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COL4A1P02462 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A1P02462 SETP11-201ENST00000473027 690 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 RPL30P12-201ENST00000474666 353 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AC134050.1-201ENST00000495088 933 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A1P02462 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.38□□□□□ -2.19
COL4A1P02462 AC022861.1-201ENST00000522981 663 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.38□□□□□ -2.19
COL4A1P02462 AC006213.4-201ENST00000616184 634 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AL449363.1-201ENST00000617815 186 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AC012640.5-201ENST00000623897 319 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AC004808.1-201ENST00000627671 721 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.38□□□□□ -2.19
COL4A1P02462 AL445984.1-201ENST00000637834 659 ntBASIC1.38□□□□□ -2.19
COL4A1P02462 AL079343.1-201ENST00000572358 1771 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
COL4A1P02462 Y_RNA.578-201ENST00000390903 88 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 TXNP7-201ENST00000406296 293 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 MTATP6P27-201ENST00000416987 621 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 AL356320.2-201ENST00000417263 507 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 MTCO2P20-201ENST00000437339 673 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL4A1P02462 AC007327.1-201ENST00000447461 264 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 AC097493.1-201ENST00000463958 372 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A1P02462 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A1P02462 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A1P02462 AC079395.1-201ENST00000510981 262 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A1P02462 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A1P02462 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A1P02462 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A1P02462 AL031601.2-202ENST00000622650 282 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A1P02462 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A1P02462 MIR1322-201ENST00000638013 71 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 CDR1-202ENST00000625883 1485 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 CENPCP1-201ENST00000533085 2578 ntBASIC1.37□□□□□ -2.19
COL4A1P02462 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
COL4A1P02462 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL4A1P02462 RNU6-28P-201ENST00000362378 107 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 RNU4-41P-201ENST00000364426 143 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 MIR17-201ENST00000385012 84 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 RNU6-754P-201ENST00000391166 107 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC068533.2-201ENST00000411872 306 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 HMGN1P14-201ENST00000412459 517 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A1P02462 TMEM167AP1-201ENST00000423409 219 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 HMGN1P33-201ENST00000432945 451 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A1P02462 EXOSC3P1-201ENST00000448649 500 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC005297.2-201ENST00000450430 606 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 FCF1P6-201ENST00000456841 595 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 RNA5SP310-201ENST00000459084 116 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 snoU13.28-201ENST00000459235 104 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC026410.2-201ENST00000460281 156 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AL135752.1-201ENST00000479477 471 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 RPS15AP34-201ENST00000487776 387 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 TMEM251P1-201ENST00000503717 318 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A1P02462 AC113347.3-201ENST00000509113 148 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC022483.1-201ENST00000514020 567 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 RNU6-1225P-201ENST00000516336 65 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 MIR514B-201ENST00000516774 80 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms