Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC005517.2-201ENST00000424673 553 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RPS3AP52-201ENST00000435639 297 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 TXNP1-201ENST00000441872 371 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 AL731563.1-201ENST00000442202 214 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RPL32P28-201ENST00000443577 397 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RPL23AP15-201ENST00000450202 459 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.74□□□□□ -1.81
COL3A1P02461 AC107399.1-201ENST00000451226 265 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.74□□□□□ -1.81
COL3A1P02461 RNU6-202P-201ENST00000515998 96 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 Y_RNA.682-201ENST00000516457 100 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 snoU109.6-201ENST00000516831 118 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RNU6-1220P-201ENST00000517126 108 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL3A1P02461 AP003497.1-201ENST00000528472 562 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 ZNF705CP-201ENST00000530515 889 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.74□□□□□ -1.81
COL3A1P02461 AL356432.3-201ENST00000568952 465 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 MIR5690-201ENST00000583739 73 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.74□□□□□ -1.81
COL3A1P02461 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.74□□□□□ -1.81
COL3A1P02461 AP000654.2-201ENST00000605633 586 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 OR6R2P-201ENST00000609216 300 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 MIR7153-201ENST00000637758 57 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL3A1P02461 AC026523.2-201ENST00000625039 7739 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
COL3A1P02461 AC116158.1-201ENST00000560231 2129 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL3A1P02461 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.74□□□□□ -1.81
COL3A1P02461 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL3A1P02461 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL3A1P02461 RNU6-249P-201ENST00000363016 102 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 Y_RNA.188-201ENST00000363952 111 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 Y_RNA.339-201ENST00000365325 102 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 Y_RNA.476-201ENST00000384347 108 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RNU6-985P-201ENST00000410182 104 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 PRELID3BP11-201ENST00000414230 479 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 MTCYBP10-201ENST00000424905 650 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AL049734.2-201ENST00000441066 616 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 HSPE1P28-201ENST00000443139 211 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AL137792.2-201ENST00000443484 235 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC083904.1-201ENST00000487828 231 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 RPL39P5-202ENST00000512505 151 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.73□□□□□ -1.81
COL3A1P02461 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 AP000907.2-201ENST00000530827 353 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 AC107016.2-201ENST00000547968 190 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC008269.2-201ENST00000561915 1105 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 AC008687.2-201ENST00000597865 520 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC007619.2-201ENST00000605743 379 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 uc_338.9-201ENST00000617424 182 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC244517.12-201ENST00000623581 663 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL3A1P02461 ASNSP1-201ENST00000518311 1939 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 MTND5P10-201ENST00000603719 1809 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC116096.1-201ENST00000566804 2314 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL3A1P02461 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL3A1P02461 Y_RNA.112-201ENST00000363250 102 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RNY4P16-201ENST00000364768 94 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 Y_RNA.530-201ENST00000384587 101 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RNU6-308P-201ENST00000390957 107 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 ARF4P3-201ENST00000397387 509 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AL360182.1-201ENST00000397433 468 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RNU4-14P-201ENST00000410858 122 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL3A1P02461 AC087499.2-201ENST00000432861 149 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 VDAC1P3-201ENST00000434069 851 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RPS20P5-201ENST00000434808 360 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 PTP4A1P4-201ENST00000512479 322 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 SCGB1D5P-201ENST00000515134 247 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 RNA5SP337-201ENST00000517007 109 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC009902.1-201ENST00000519351 183 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.73□□□□□ -1.81
COL3A1P02461 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.73□□□□□ -1.81
COL3A1P02461 MIR3146-201ENST00000580367 79 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AL353997.4-201ENST00000586196 166 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AP001029.3-201ENST00000588063 596 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 AC022418.1-201ENST00000624118 445 ntBASIC3.73□□□□□ -1.81
COL3A1P02461 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.73□□□□□ -1.81
COL3A1P02461 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.73□□□□□ -1.81
COL3A1P02461 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL3A1P02461 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms