Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC010889.1-201ENST00000566193 2666 ntBASIC1.82□□□□□ -2.12
HLA-DQB1P01920 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 CENPCP1-201ENST00000533085 2578 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 Y_RNA.333-201ENST00000365274 102 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 SMIM11P1-201ENST00000369586 178 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 MIR524-201ENST00000385242 87 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 RNU2-36P-201ENST00000410361 191 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 RNU2-68P-201ENST00000410878 191 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC096649.2-201ENST00000416186 393 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 MED14P1-201ENST00000430517 648 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AL365184.2-201ENST00000431139 435 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AL512286.1-201ENST00000439244 400 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 HMGN2P10-201ENST00000448085 265 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 MTATP6P7-201ENST00000453315 681 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC026801.1-201ENST00000497178 464 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 RNU6-678P-201ENST00000516832 109 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 SNORA31.18-201ENST00000517043 134 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC022616.6-201ENST00000520479 119 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 EEF1A1P37-201ENST00000522748 715 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC234778.2-201ENST00000566241 354 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 MIR3200-201ENST00000580767 85 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC005261.5-201ENST00000596280 355 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 BNIP3P33-201ENST00000598912 569 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AL391813.1-201ENST00000603098 260 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AL356280.1-201ENST00000603614 379 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC245884.12-201ENST00000615364 59 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AP003485.2-201ENST00000623636 610 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC091953.2-201ENST00000623979 160 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 CU459211.1-201ENST00000635667 749 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 AC006927.3-201ENST00000638789 384 ntBASIC1.81□□□□□ -2.12
HLA-DQB1P01920 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HLA-DQB1P01920 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RNU5F-6P-201ENST00000362979 116 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RNU4-1-201ENST00000363925 141 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RNA5SP387-201ENST00000364226 106 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RNU6-809P-201ENST00000384461 107 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 ELOCP17-201ENST00000414751 326 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC104651.1-201ENST00000427559 735 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RPL36AP53-201ENST00000432891 316 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 MTND5P2-201ENST00000442927 1142 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 NEFMP1-201ENST00000443423 1006 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 OSTCP8-201ENST00000445117 448 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RNU7-26P-201ENST00000458980 63 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC068587.2-201ENST00000478386 781 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC004924.1-201ENST00000480160 781 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC105252.1-201ENST00000503089 286 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC116347.2-201ENST00000514912 523 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 SNORA31.6-201ENST00000516241 130 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 MRPS36P5-201ENST00000551909 298 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 NACAP3-201ENST00000552100 481 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC021739.1-201ENST00000559631 174 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AL138976.2-201ENST00000563989 694 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC023824.2-201ENST00000566185 400 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 RPS15AP11-201ENST00000594193 385 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC092140.2-201ENST00000618027 521 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AL031601.2-202ENST00000622650 282 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AC017037.3-201ENST00000625016 472 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DQB1P01920 AL445523.1-201ENST00000451184 1362 ntBASIC1.8□□□□□ -2.12
HLA-DQB1P01920 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
HLA-DQB1P01920 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HLA-DQB1P01920 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms