Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR504-201ENST00000385065 83 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 AL162578.1-201ENST00000406202 378 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 RNA5SP104-201ENST00000410989 118 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 AC079780.1-201ENST00000428259 207 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 SNORD109B-201ENST00000458961 67 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 SNORD109A-201ENST00000459128 67 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 RNU7-180P-201ENST00000459240 63 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 HMGN2P26-201ENST00000463169 339 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 AC106872.2-201ENST00000494303 480 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 AC078814.3-201ENST00000553036 491 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 RNU6-89P-201ENST00000606519 100 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 AL359314.1-201ENST00000616913 261 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 AL590808.1-201ENST00000618696 141 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAPGEF3O95398 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 TPTE2P4-201ENST00000258589 1605 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AP001350.1-201ENST00000601906 1524 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC073325.2-201ENST00000339545 159 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 Y_RNA.100-201ENST00000363141 102 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 RNU6-38P-201ENST00000384085 107 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 RNU6-817P-201ENST00000391083 104 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 EEF1A1P40-201ENST00000412883 573 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 RPL7P46-201ENST00000425129 740 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC093019.1-201ENST00000443135 252 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 RNU6-333P-201ENST00000459117 107 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC108860.1-201ENST00000484521 383 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC117522.3-201ENST00000507974 584 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 MTND3P22-201ENST00000510932 243 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC008413.1-201ENST00000511864 177 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 SCGB1D5P-201ENST00000515134 247 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 SNORA31.3-201ENST00000516029 96 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 RNA5SP309-201ENST00000516670 106 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 RNU6-677P-201ENST00000516914 101 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 MTND4P7-201ENST00000523876 130 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 AL137161.1-201ENST00000532231 390 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AL355836.1-201ENST00000555951 870 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC008521.1-201ENST00000587471 187 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC013553.2-201ENST00000604244 589 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC012409.4-201ENST00000612923 249 ntBASIC4.57□□□□□ -1.68
RAPGEF3O95398 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAPGEF3O95398 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.57□□□□□ -1.68
RAPGEF3O95398 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAPGEF3O95398 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAPGEF3O95398 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAPGEF3O95398 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAPGEF3O95398 Y_RNA.11-201ENST00000362375 109 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 RNU5A-1-201ENST00000362698 116 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 RNU4-66P-201ENST00000365199 138 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 RNU6-510P-201ENST00000391239 108 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAPGEF3O95398 RNU4-26P-201ENST00000410270 107 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 TOMM22P1-201ENST00000418578 312 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC018630.2-202ENST00000422992 927 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 MTCO3P46-201ENST00000425787 232 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 RPL7L1P10-201ENST00000427790 463 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC087499.2-201ENST00000432861 149 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 snoU13.4-201ENST00000458916 104 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 RNU6-953P-201ENST00000459154 107 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 RPL21P99-201ENST00000480369 423 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 RPL31P13-201ENST00000484151 370 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 RN7SKP60-201ENST00000516985 239 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC023050.3-201ENST00000541142 333 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 MIR3921-201ENST00000577308 85 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 C8orf59P2-201ENST00000603441 271 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 AC006023.2-201ENST00000609916 167 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 uc_338.34-201ENST00000617467 174 ntBASIC4.56□□□□□ -1.68
RAPGEF3O95398 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.56□□□□□ -1.68
RAPGEF3O95398 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAPGEF3O95398 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 RNU4-20P-201ENST00000365601 151 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 RPL30P2-201ENST00000414021 291 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL513477.1-202ENST00000417061 214 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 RPL21P66-201ENST00000426566 466 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms