Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX3O95343 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIX3O95343 RNU4-82P-201ENST00000362443 140 ntBASIC2.76□□□□□ -1.97
SIX3O95343 U3.4-201ENST00000363352 213 ntBASIC2.76□□□□□ -1.97
SIX3O95343 RNU6-19P-201ENST00000384718 107 ntBASIC2.76□□□□□ -1.97
SIX3O95343 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.76□□□□□ -1.97
SIX3O95343 RNU6-195P-201ENST00000411352 109 ntBASIC2.76□□□□□ -1.97
SIX3O95343 RPL7P10-201ENST00000417407 739 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AC022018.1-201ENST00000430685 241 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AC073614.1-201ENST00000438690 650 ntBASIC2.76□□□□□ -1.97
SIX3O95343 MTND1P27-201ENST00000451117 902 ntBASIC2.76□□□□□ -1.97
SIX3O95343 BTF3P15-201ENST00000455606 336 ntBASIC2.76□□□□□ -1.97
SIX3O95343 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.76□□□□□ -1.97
SIX3O95343 AC091965.2-201ENST00000512324 613 ntBASIC2.76□□□□□ -1.97
SIX3O95343 RNA5SP76-201ENST00000516277 87 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX3O95343 AC006199.1-201ENST00000548728 219 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AL157871.3-201ENST00000557231 293 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX3O95343 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX3O95343 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX3O95343 MIR15A-201ENST00000607334 83 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AC005046.1-201ENST00000608515 625 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AC024940.5-201ENST00000622889 474 ntBASIC2.76□□□□□ -1.97
SIX3O95343 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX3O95343 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX3O95343 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIX3O95343 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX3O95343 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.76□□□□□ -1.97
SIX3O95343 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX3O95343 Y_RNA.33-201ENST00000362591 102 ntBASIC2.75□□□□□ -1.97
SIX3O95343 SNORA4.3-201ENST00000365564 137 ntBASIC2.75□□□□□ -1.97
SIX3O95343 RNU6-1083P-201ENST00000384022 107 ntBASIC2.75□□□□□ -1.97
SIX3O95343 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
SIX3O95343 MIR558-201ENST00000384920 94 ntBASIC2.75□□□□□ -1.97
SIX3O95343 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
SIX3O95343 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX3O95343 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX3O95343 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX3O95343 MED13P1-201ENST00000428342 171 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX3O95343 RPS15AP7-201ENST00000439294 405 ntBASIC2.75□□□□□ -1.97
SIX3O95343 HMGN2P10-201ENST00000448085 265 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AC092001.1-201ENST00000453012 261 ntBASIC2.75□□□□□ -1.97
SIX3O95343 RNA5SP269-201ENST00000459032 137 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AC133134.1-201ENST00000466800 359 ntBASIC2.75□□□□□ -1.97
SIX3O95343 TRBV1-201ENST00000476502 284 ntBASIC2.75□□□□□ -1.97
SIX3O95343 RPS29P26-201ENST00000477483 171 ntBASIC2.75□□□□□ -1.97
SIX3O95343 TRBV12-1-201ENST00000479785 344 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX3O95343 AC091826.1-201ENST00000514065 313 ntBASIC2.75□□□□□ -1.97
SIX3O95343 RNU6-1183P-201ENST00000517054 60 ntBASIC2.75□□□□□ -1.97
SIX3O95343 SNORA31.19-201ENST00000517079 126 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.75□□□□□ -1.97
SIX3O95343 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.75□□□□□ -1.97
SIX3O95343 AC022616.3-201ENST00000523940 148 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AP003122.3-201ENST00000526316 255 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AC084851.1-201ENST00000529105 249 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AP002404.1-201ENST00000532005 451 ntBASIC2.75□□□□□ -1.97
SIX3O95343 HPRT1P3-201ENST00000539521 576 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AC087883.1-201ENST00000551882 391 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX3O95343 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX3O95343 MIR3117-201ENST00000584034 78 ntBASIC2.75□□□□□ -1.97
SIX3O95343 NRBF2P1-201ENST00000587407 859 ntBASIC2.75□□□□□ -1.97
SIX3O95343 MIR98-201ENST00000606724 119 ntBASIC2.75□□□□□ -1.97
SIX3O95343 AL139286.2-201ENST00000606838 396 ntBASIC2.75□□□□□ -1.97
SIX3O95343 TEX21P-201ENST00000447107 1476 ntBASIC2.75□□□□□ -1.97
SIX3O95343 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIX3O95343 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIX3O95343 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX3O95343 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX3O95343 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SIX3O95343 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX3O95343 FARSBP1-201ENST00000435808 1778 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
SIX3O95343 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
SIX3O95343 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX3O95343 U8.3-201ENST00000363321 132 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RNU4-1-201ENST00000363925 141 ntBASIC2.74□□□□□ -1.97
SIX3O95343 SNORA68.1-201ENST00000364537 132 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RN7SKP226-201ENST00000364912 300 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RNU6-1280P-201ENST00000365211 107 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RNU6-395P-201ENST00000365662 106 ntBASIC2.74□□□□□ -1.97
SIX3O95343 BX682237.1-201ENST00000415016 335 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AL109913.1-201ENST00000421173 514 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX3O95343 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
SIX3O95343 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX3O95343 AL591704.1-201ENST00000432574 275 ntBASIC2.74□□□□□ -1.97
SIX3O95343 BRK1P2-201ENST00000442875 223 ntBASIC2.74□□□□□ -1.97
SIX3O95343 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX3O95343 AL078601.1-201ENST00000444542 271 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX3O95343 AC107626.1-201ENST00000471084 183 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC103975.1-201ENST00000482506 483 ntBASIC2.74□□□□□ -1.97
SIX3O95343 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC109927.2-201ENST00000506416 303 ntBASIC2.74□□□□□ -1.97
SIX3O95343 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SIX3O95343 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms