Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
VAPBO95292 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
VAPBO95292 Y_RNA.311-201ENST00000365068 96 ntBASIC1.8□□□□□ -2.12
VAPBO95292 MIR320C1-201ENST00000408566 88 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC069282.1-201ENST00000411911 526 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.8□□□□□ -2.12
VAPBO95292 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VAPBO95292 MTCO1P42-201ENST00000457379 726 ntBASIC1.8□□□□□ -2.12
VAPBO95292 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.8□□□□□ -2.12
VAPBO95292 AC108729.1-201ENST00000487812 947 ntBASIC1.8□□□□□ -2.12
VAPBO95292 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC016550.1-201ENST00000505348 785 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC092436.1-201ENST00000506450 503 ntBASIC1.8□□□□□ -2.12
VAPBO95292 MRPS17P9-201ENST00000511924 393 ntBASIC1.8□□□□□ -2.12
VAPBO95292 RNU2-44P-201ENST00000516795 194 ntBASIC1.8□□□□□ -2.12
VAPBO95292 RNA5SP137-201ENST00000516833 135 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
VAPBO95292 UBE2L4-201ENST00000587688 464 ntBASIC1.8□□□□□ -2.12
VAPBO95292 BNIP3P23-201ENST00000599655 511 ntBASIC1.8□□□□□ -2.12
VAPBO95292 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC006270.3-201ENST00000605967 1036 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC024060.1-201ENST00000607052 494 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC103710.2-201ENST00000609912 942 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AL133445.2-201ENST00000611191 527 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPBO95292 AL158801.5-201ENST00000623123 465 ntBASIC1.8□□□□□ -2.12
VAPBO95292 AC112204.3-201ENST00000623822 332 ntBASIC1.8□□□□□ -2.12
VAPBO95292 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VAPBO95292 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.79□□□□□ -2.12
VAPBO95292 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VAPBO95292 AL359634.1-202ENST00000404721 284 ntBASIC1.79□□□□□ -2.12
VAPBO95292 MTCO1P17-201ENST00000411522 491 ntBASIC1.79□□□□□ -2.12
VAPBO95292 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPBO95292 AL353706.1-201ENST00000436728 494 ntBASIC1.79□□□□□ -2.12
VAPBO95292 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.79□□□□□ -2.12
VAPBO95292 RPS15AP9-201ENST00000439856 381 ntBASIC1.79□□□□□ -2.12
VAPBO95292 USP9YP15-201ENST00000442391 422 ntBASIC1.79□□□□□ -2.12
VAPBO95292 PPP1R2P5-201ENST00000457256 603 ntBASIC1.79□□□□□ -2.12
VAPBO95292 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPBO95292 AC140059.1-201ENST00000489238 361 ntBASIC1.79□□□□□ -2.12
VAPBO95292 AC093752.1-206ENST00000511823 336 ntBASIC1.79□□□□□ -2.12
VAPBO95292 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.79□□□□□ -2.12
VAPBO95292 RANP3-201ENST00000530970 276 ntBASIC1.79□□□□□ -2.12
VAPBO95292 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
VAPBO95292 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPBO95292 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VAPBO95292 YWHAZP1-201ENST00000556286 722 ntBASIC1.79□□□□□ -2.12
VAPBO95292 MTND4LP25-201ENST00000570218 163 ntBASIC1.79□□□□□ -2.12
VAPBO95292 AC012213.3-201ENST00000577199 777 ntBASIC1.79□□□□□ -2.12
VAPBO95292 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
VAPBO95292 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.79□□□□□ -2.12
VAPBO95292 AL031274.2-201ENST00000599419 203 ntBASIC1.79□□□□□ -2.12
VAPBO95292 AC005296.1-201ENST00000616145 209 ntBASIC1.79□□□□□ -2.12
VAPBO95292 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
VAPBO95292 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPBO95292 ZNF702P-202ENST00000434269 1966 ntBASIC1.79□□□□□ -2.12
VAPBO95292 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VAPBO95292 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VAPBO95292 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VAPBO95292 RNU6-560P-201ENST00000364007 108 ntBASIC1.78□□□□□ -2.12
VAPBO95292 RNU6-1280P-201ENST00000365211 107 ntBASIC1.78□□□□□ -2.12
VAPBO95292 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VAPBO95292 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
VAPBO95292 NDUFS5P1-201ENST00000405668 289 ntBASIC1.78□□□□□ -2.12
VAPBO95292 USP9YP33-201ENST00000412220 421 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPBO95292 ZNF90P2-204ENST00000419323 1075 ntBASIC1.78□□□□□ -2.12
VAPBO95292 XKRYP1-201ENST00000423438 492 ntBASIC1.78□□□□□ -2.12
VAPBO95292 USP9YP11-201ENST00000427537 717 ntBASIC1.78□□□□□ -2.12
VAPBO95292 XKRYP2-201ENST00000432915 492 ntBASIC1.78□□□□□ -2.12
VAPBO95292 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.78□□□□□ -2.12
VAPBO95292 USP9YP35-201ENST00000435696 412 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AL353689.1-201ENST00000438895 199 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AL161788.1-201ENST00000441805 169 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPBO95292 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPBO95292 AC117503.1-201ENST00000472241 394 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC139453.3-201ENST00000493276 369 ntBASIC1.78□□□□□ -2.12
VAPBO95292 SUMO2P5-201ENST00000506790 245 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPBO95292 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.78□□□□□ -2.12
VAPBO95292 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.78□□□□□ -2.12
VAPBO95292 SNORA4.4-201ENST00000515921 135 ntBASIC1.78□□□□□ -2.12
VAPBO95292 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
VAPBO95292 RNU1-41P-201ENST00000516161 162 ntBASIC1.78□□□□□ -2.12
VAPBO95292 RNU1-48P-201ENST00000516400 162 ntBASIC1.78□□□□□ -2.12
VAPBO95292 RNU6-143P-201ENST00000516942 93 ntBASIC1.78□□□□□ -2.12
VAPBO95292 RNU6-1183P-201ENST00000517054 60 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.78□□□□□ -2.12
VAPBO95292 AC107953.1-201ENST00000522216 297 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms