Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RNU6-156P-201ENST00000621869 107 ntBASIC0.8□□□□□ -2.28
LTN1O94822 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
LTN1O94822 RNU6-115P-201ENST00000364310 107 ntBASIC0.79□□□□□ -2.28
LTN1O94822 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.79□□□□□ -2.28
LTN1O94822 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.79□□□□□ -2.28
LTN1O94822 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LTN1O94822 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
LTN1O94822 RPL23AP32-201ENST00000395315 459 ntBASIC0.78□□□□□ -2.28
LTN1O94822 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.78□□□□□ -2.28
LTN1O94822 RPS27P23-201ENST00000487608 251 ntBASIC0.78□□□□□ -2.28
LTN1O94822 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.78□□□□□ -2.28
LTN1O94822 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LTN1O94822 RNU6-942P-201ENST00000363002 107 ntBASIC0.78□□□□□ -2.29
LTN1O94822 RPL37P10-201ENST00000412884 288 ntBASIC0.78□□□□□ -2.29
LTN1O94822 AC092047.1-201ENST00000424997 240 ntBASIC0.78□□□□□ -2.29
LTN1O94822 AC245047.4-201ENST00000433189 144 ntBASIC0.78□□□□□ -2.29
LTN1O94822 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.78□□□□□ -2.29
LTN1O94822 UBL5P1-201ENST00000507979 193 ntBASIC0.78□□□□□ -2.29
LTN1O94822 RNU6-496P-201ENST00000516145 99 ntBASIC0.78□□□□□ -2.29
LTN1O94822 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.78□□□□□ -2.29
LTN1O94822 NIFKP6-201ENST00000598115 845 ntBASIC0.78□□□□□ -2.29
LTN1O94822 RNA5SP125-201ENST00000364843 120 ntBASIC0.77□□□□□ -2.29
LTN1O94822 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.77□□□□□ -2.29
LTN1O94822 AC018630.2-202ENST00000422992 927 ntBASIC0.77□□□□□ -2.29
LTN1O94822 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.77□□□□□ -2.29
LTN1O94822 RPS20P10-201ENST00000451209 253 ntBASIC0.77□□□□□ -2.29
LTN1O94822 RNU7-23P-201ENST00000459465 62 ntBASIC0.77□□□□□ -2.29
LTN1O94822 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LTN1O94822 SNORA70.16-201ENST00000516390 95 ntBASIC0.77□□□□□ -2.29
LTN1O94822 RNU6-1282P-201ENST00000516735 96 ntBASIC0.77□□□□□ -2.29
LTN1O94822 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.77□□□□□ -2.29
LTN1O94822 FRG1HP-204ENST00000617940 757 ntBASIC0.77□□□□□ -2.29
LTN1O94822 AP006248.3-201ENST00000623580 594 ntBASIC0.77□□□□□ -2.29
LTN1O94822 AC090517.3-201ENST00000625170 141 ntBASIC0.77□□□□□ -2.29
LTN1O94822 AC004808.1-201ENST00000627671 721 ntBASIC0.77□□□□□ -2.29
LTN1O94822 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.76□□□□□ -2.29
LTN1O94822 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.76□□□□□ -2.29
LTN1O94822 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.76□□□□□ -2.29
LTN1O94822 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.76□□□□□ -2.29
LTN1O94822 AC018437.1-201ENST00000492214 406 ntBASIC0.76□□□□□ -2.29
LTN1O94822 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.76□□□□□ -2.29
LTN1O94822 AL133241.1-201ENST00000556832 487 ntBASIC0.76□□□□□ -2.29
LTN1O94822 MIR4422-201ENST00000581938 83 ntBASIC0.76□□□□□ -2.29
LTN1O94822 AP002826.1-201ENST00000608835 315 ntBASIC0.76□□□□□ -2.29
LTN1O94822 MIR6086-201ENST00000638065 55 ntBASIC0.76□□□□□ -2.29
LTN1O94822 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.75□□□□□ -2.29
LTN1O94822 NACAP2-201ENST00000318548 624 ntBASIC0.75□□□□□ -2.29
LTN1O94822 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
LTN1O94822 VTRNA1-3-201ENST00000365645 89 ntBASIC0.75□□□□□ -2.29
LTN1O94822 SNORA22-201ENST00000383907 134 ntBASIC0.75□□□□□ -2.29
LTN1O94822 SNORA8-201ENST00000384574 139 ntBASIC0.75□□□□□ -2.29
LTN1O94822 SNORA22C-201ENST00000384614 134 ntBASIC0.75□□□□□ -2.29
LTN1O94822 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
LTN1O94822 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LTN1O94822 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.75□□□□□ -2.29
LTN1O94822 PNPLA4P1-201ENST00000458328 305 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AC008379.1-201ENST00000463655 464 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.75□□□□□ -2.29
LTN1O94822 CBX3P3-201ENST00000508108 532 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AC098591.2-201ENST00000510152 315 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AF213884.2-201ENST00000510417 903 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.75□□□□□ -2.29
LTN1O94822 HMGB1P14-201ENST00000557424 591 ntBASIC0.75□□□□□ -2.29
LTN1O94822 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.75□□□□□ -2.29
LTN1O94822 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.75□□□□□ -2.29
LTN1O94822 AC008945.2-201ENST00000606056 604 ntBASIC0.75□□□□□ -2.29
LTN1O94822 MTND5P11-201ENST00000511037 1812 ntBASIC0.75□□□□□ -2.29
LTN1O94822 RNU6-1222P-201ENST00000384615 107 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AL589655.1-201ENST00000405398 482 ntBASIC0.75□□□□□ -2.29
LTN1O94822 RNU6-272P-201ENST00000411028 104 ntBASIC0.75□□□□□ -2.29
LTN1O94822 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.75□□□□□ -2.29
LTN1O94822 AC099548.1-201ENST00000421443 426 ntBASIC0.75□□□□□ -2.29
LTN1O94822 CST2P1-201ENST00000425770 87 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.75□□□□□ -2.29
LTN1O94822 AP001269.3-201ENST00000588718 329 ntBASIC0.75□□□□□ -2.29
LTN1O94822 AC099842.1-201ENST00000619919 596 ntBASIC0.75□□□□□ -2.29
LTN1O94822 MTND4P12-201ENST00000498999 1377 ntBASIC0.75□□□□□ -2.29
LTN1O94822 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LTN1O94822 RNU4-23P-201ENST00000362839 140 ntBASIC0.74□□□□□ -2.29
LTN1O94822 HMGN2P39-201ENST00000398005 273 ntBASIC0.74□□□□□ -2.29
LTN1O94822 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.74□□□□□ -2.29
LTN1O94822 AC093106.2-201ENST00000428212 385 ntBASIC0.74□□□□□ -2.29
LTN1O94822 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
LTN1O94822 OR5B19P-201ENST00000531766 928 ntBASIC0.74□□□□□ -2.29
LTN1O94822 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.74□□□□□ -2.29
LTN1O94822 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.74□□□□□ -2.29
LTN1O94822 MIR7157-201ENST00000635801 60 ntBASIC0.74□□□□□ -2.29
LTN1O94822 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
LTN1O94822 RNA5SP258-201ENST00000362750 119 ntBASIC0.73□□□□□ -2.29
LTN1O94822 MIR30A-201ENST00000385092 71 ntBASIC0.73□□□□□ -2.29
LTN1O94822 RPL31P35-201ENST00000431058 377 ntBASIC0.73□□□□□ -2.29
LTN1O94822 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.73□□□□□ -2.29
LTN1O94822 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.73□□□□□ -2.29
LTN1O94822 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.73□□□□□ -2.29
LTN1O94822 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.73□□□□□ -2.29
LTN1O94822 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.73□□□□□ -2.29
LTN1O94822 RNF138P1-201ENST00000502765 546 ntBASIC0.73□□□□□ -2.29
LTN1O94822 HMGB1P35-201ENST00000503360 598 ntBASIC0.73□□□□□ -2.29
LTN1O94822 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.73□□□□□ -2.29
LTN1O94822 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms