Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 Y_RNA.346-201ENST00000365385 112 ntBASIC0.18□□□□□ -2.38
USH2AO75445 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.18□□□□□ -2.38
USH2AO75445 RNU6-84P-201ENST00000607737 102 ntBASIC0.18□□□□□ -2.38
USH2AO75445 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AL592148.2-201ENST00000612210 372 ntBASIC0.18□□□□□ -2.38
USH2AO75445 uc_338.6-201ENST00000613544 171 ntBASIC0.18□□□□□ -2.38
USH2AO75445 FAM157B-203ENST00000639350 358 ntBASIC0.18□□□□□ -2.38
USH2AO75445 SNORD114-28-201ENST00000363610 72 ntBASIC0.18□□□□□ -2.38
USH2AO75445 SNORD23.1-201ENST00000408212 104 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AL356867.1-201ENST00000429623 299 ntBASIC0.18□□□□□ -2.38
USH2AO75445 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.18□□□□□ -2.38
USH2AO75445 MIR3690-201ENST00000580266 75 ntBASIC0.18□□□□□ -2.38
USH2AO75445 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.18□□□□□ -2.38
USH2AO75445 Y_RNA.778-201ENST00000620203 90 ntBASIC0.18□□□□□ -2.38
USH2AO75445 HSBP1P2-201ENST00000299671 229 ntBASIC0.18□□□□□ -2.38
USH2AO75445 RPS3AP36-201ENST00000398190 775 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AL133384.1-201ENST00000412744 351 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.18□□□□□ -2.38
USH2AO75445 AP1S2P1-201ENST00000457344 379 ntBASIC0.18□□□□□ -2.38
USH2AO75445 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.18□□□□□ -2.38
USH2AO75445 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
USH2AO75445 AC074198.2-201ENST00000508153 258 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.18□□□□□ -2.38
USH2AO75445 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
USH2AO75445 RNU6-1180P-201ENST00000364935 107 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RNU6-152P-201ENST00000384037 107 ntBASIC0.17□□□□□ -2.38
USH2AO75445 SNORA8-201ENST00000384574 139 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RNU6-1184P-201ENST00000384588 108 ntBASIC0.17□□□□□ -2.38
USH2AO75445 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
USH2AO75445 AL356131.1-201ENST00000405826 414 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RPS26P42-201ENST00000413485 326 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RNU1-98P-201ENST00000458992 160 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.17□□□□□ -2.38
USH2AO75445 AC024405.2-202ENST00000532731 184 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.17□□□□□ -2.38
USH2AO75445 AL157871.3-201ENST00000557231 293 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC068714.1-201ENST00000559623 800 ntBASIC0.17□□□□□ -2.38
USH2AO75445 XIAPP1-201ENST00000603162 600 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RNU6-19P-201ENST00000384718 107 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RNA5SP451-201ENST00000410588 110 ntBASIC0.17□□□□□ -2.38
USH2AO75445 OFD1P18Y-201ENST00000420889 959 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.17□□□□□ -2.38
USH2AO75445 CABYRP1-201ENST00000465493 1045 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.17□□□□□ -2.38
USH2AO75445 AC008751.2-201ENST00000597885 980 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC073410.2-201ENST00000603240 332 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC008121.1-201ENST00000603244 268 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.17□□□□□ -2.38
USH2AO75445 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
USH2AO75445 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.17□□□□□ -2.38
USH2AO75445 AC244023.1-201ENST00000426884 112 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.17□□□□□ -2.38
USH2AO75445 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.17□□□□□ -2.38
USH2AO75445 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.17□□□□□ -2.38
USH2AO75445 AC242498.1-201ENST00000604134 111 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC243994.1-201ENST00000618627 109 ntBASIC0.17□□□□□ -2.38
USH2AO75445 CBX3P1-201ENST00000325243 554 ntBASIC0.17□□□□□ -2.38
USH2AO75445 MIR934-201ENST00000401241 83 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC009302.1-201ENST00000417147 390 ntBASIC0.17□□□□□ -2.38
USH2AO75445 RPEP5-201ENST00000441137 268 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC097493.1-201ENST00000463958 372 ntBASIC0.17□□□□□ -2.38
USH2AO75445 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.17□□□□□ -2.38
USH2AO75445 IGKV1-22-201ENST00000524313 326 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC093023.1-201ENST00000547375 507 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.17□□□□□ -2.38
USH2AO75445 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.17□□□□□ -2.38
USH2AO75445 FRG1HP-204ENST00000617940 757 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC006065.5-201ENST00000623427 349 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC073308.1-201ENST00000623696 305 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AC091925.2-201ENST00000625059 256 ntBASIC0.17□□□□□ -2.38
USH2AO75445 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.17□□□□□ -2.38
USH2AO75445 MIR224-201ENST00000384889 81 ntBASIC0.16□□□□□ -2.38
USH2AO75445 MIR32-201ENST00000384965 70 ntBASIC0.16□□□□□ -2.38
USH2AO75445 SNRPEP7-201ENST00000438350 220 ntBASIC0.16□□□□□ -2.38
USH2AO75445 HMGN2P10-201ENST00000448085 265 ntBASIC0.16□□□□□ -2.38
USH2AO75445 OR5AK1P-201ENST00000524837 922 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AC141557.1-201ENST00000540982 400 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.16□□□□□ -2.38
USH2AO75445 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
USH2AO75445 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
USH2AO75445 HMGN2P22-201ENST00000427588 175 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.16□□□□□ -2.38
USH2AO75445 RNU6-491P-201ENST00000516099 110 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AC067838.1-201ENST00000606064 577 ntBASIC0.16□□□□□ -2.38
USH2AO75445 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.16□□□□□ -2.38
USH2AO75445 MIR635-201ENST00000384830 98 ntBASIC0.16□□□□□ -2.38
USH2AO75445 RNU4-65P-201ENST00000410473 140 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AC104685.1-201ENST00000502445 371 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AP003049.1-201ENST00000529418 457 ntBASIC0.16□□□□□ -2.38
USH2AO75445 Z83818.1-201ENST00000603584 150 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AL355297.3-201ENST00000604082 446 ntBASIC0.16□□□□□ -2.38
USH2AO75445 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.16□□□□□ -2.38
USH2AO75445 AP001350.1-201ENST00000601906 1524 ntBASIC0.16□□□□□ -2.38
USH2AO75445 Y_RNA.493-201ENST00000384422 102 ntBASIC0.16□□□□□ -2.38
USH2AO75445 Y_RNA.498-201ENST00000384460 102 ntBASIC0.16□□□□□ -2.38
USH2AO75445 SNORA32.3-201ENST00000384772 121 ntBASIC0.16□□□□□ -2.38
USH2AO75445 AL136372.1-201ENST00000403060 228 ntBASIC0.16□□□□□ -2.38
USH2AO75445 CCNG1P1-201ENST00000406783 885 ntBASIC0.16□□□□□ -2.38
USH2AO75445 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.16□□□□□ -2.38
USH2AO75445 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms