Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 BX119904.4-201ENST00000424402 301 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.08□□□□□ -2.24
PFDN1O60925 C1DP1-201ENST00000426049 402 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 AL590623.1-201ENST00000427864 105 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 MTCYBP11-201ENST00000447254 1109 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.08□□□□□ -2.24
PFDN1O60925 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.08□□□□□ -2.24
PFDN1O60925 AC117503.1-201ENST00000472241 394 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.08□□□□□ -2.24
PFDN1O60925 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
PFDN1O60925 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
PFDN1O60925 BNIP3P27-201ENST00000599991 412 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 AL390208.1-201ENST00000605885 644 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 AC064859.1-201ENST00000624741 174 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 MIR4275-201ENST00000636486 87 ntBASIC1.08□□□□□ -2.24
PFDN1O60925 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
PFDN1O60925 MIR208A-201ENST00000362287 71 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 Y_RNA.67-201ENST00000362870 100 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 RNU6-637P-201ENST00000384050 107 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
PFDN1O60925 RPL22P22-201ENST00000395439 379 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 RNU2-48P-201ENST00000410694 191 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.07□□□□□ -2.24
PFDN1O60925 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 RPL39P6-201ENST00000448289 150 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 GTF2IP12-201ENST00000456547 356 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 SNORA25.15-201ENST00000516487 89 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 AC087276.1-201ENST00000529659 480 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.07□□□□□ -2.24
PFDN1O60925 AC005832.3-201ENST00000537929 631 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.07□□□□□ -2.24
PFDN1O60925 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.07□□□□□ -2.24
PFDN1O60925 AC017037.3-201ENST00000625016 472 ntBASIC1.07□□□□□ -2.24
PFDN1O60925 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.06□□□□□ -2.24
PFDN1O60925 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
PFDN1O60925 Y_RNA.333-201ENST00000365274 102 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PFDN1O60925 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PFDN1O60925 RNU2-68P-201ENST00000410878 191 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 TAF13P2-201ENST00000416876 286 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AL353621.1-201ENST00000418219 243 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AL358453.1-201ENST00000422522 250 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.06□□□□□ -2.24
PFDN1O60925 USP9YP35-201ENST00000435696 412 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AL354941.1-201ENST00000438600 464 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 CR769776.1-201ENST00000441254 787 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.06□□□□□ -2.24
PFDN1O60925 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.06□□□□□ -2.24
PFDN1O60925 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.06□□□□□ -2.24
PFDN1O60925 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.06□□□□□ -2.24
PFDN1O60925 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.06□□□□□ -2.24
PFDN1O60925 AC027309.2-201ENST00000520566 192 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.06□□□□□ -2.24
PFDN1O60925 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
PFDN1O60925 CLIC4P2-201ENST00000601934 717 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AC010900.2-201ENST00000604508 210 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.06□□□□□ -2.24
PFDN1O60925 VN1R9P-201ENST00000614184 867 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 ZNF72P-201ENST00000425869 1908 ntBASIC1.06□□□□□ -2.24
PFDN1O60925 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
PFDN1O60925 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.05□□□□□ -2.24
PFDN1O60925 RNU6-1164P-201ENST00000364428 107 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AL627390.1-201ENST00000396055 340 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 SNORA3.2-201ENST00000408221 125 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 RNA5SP100-201ENST00000410903 110 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 RNA5SP59-201ENST00000410922 110 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 RNA5SP508-201ENST00000411327 119 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 PIGPP2-201ENST00000411569 458 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 RPL23AP36-201ENST00000413895 458 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC007435.1-201ENST00000421086 415 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.05□□□□□ -2.24
PFDN1O60925 HMGB1P31-201ENST00000437242 427 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.05□□□□□ -2.24
PFDN1O60925 RPL39P29-201ENST00000447779 157 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 OR6C5P-201ENST00000452388 923 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AL672167.3-201ENST00000465951 960 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.05□□□□□ -2.24
PFDN1O60925 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.05□□□□□ -2.24
PFDN1O60925 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.05□□□□□ -2.24
PFDN1O60925 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.05□□□□□ -2.24
PFDN1O60925 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC022861.1-201ENST00000522981 663 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 COPS8P3-201ENST00000526024 482 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.05□□□□□ -2.24
PFDN1O60925 AC023813.2-201ENST00000564321 469 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC090615.1-201ENST00000577519 154 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
PFDN1O60925 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.05□□□□□ -2.24
PFDN1O60925 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.05□□□□□ -2.24
PFDN1O60925 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.05□□□□□ -2.24
PFDN1O60925 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AC091834.1-201ENST00000614543 472 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 AL590808.1-201ENST00000618696 141 ntBASIC1.05□□□□□ -2.24
PFDN1O60925 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms