Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC007998.5-201ENST00000622938 237 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 SNORD56.2-201ENST00000363242 71 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 SNORA25.6-201ENST00000364121 118 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.45□□□□□ -2.02
LCMT2O60294 SNORD116-2-201ENST00000384274 95 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 SNORD116-6-201ENST00000384711 96 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 RNU6-750P-201ENST00000390946 107 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 RPL23AP32-201ENST00000395315 459 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 RNU6-248P-201ENST00000410720 107 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.45□□□□□ -2.02
LCMT2O60294 AC006366.1-201ENST00000422002 759 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.45□□□□□ -2.02
LCMT2O60294 AC098826.1-201ENST00000433943 471 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.45□□□□□ -2.02
LCMT2O60294 HMGB3P12-201ENST00000438745 556 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.45□□□□□ -2.02
LCMT2O60294 USP9YP29-201ENST00000445112 563 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC104389.3-201ENST00000445629 235 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.45□□□□□ -2.02
LCMT2O60294 AC009961.3-201ENST00000449832 765 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 GAPDHP17-201ENST00000449858 1001 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LCMT2O60294 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LCMT2O60294 AL033528.1-201ENST00000453780 140 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 SNORD42A-201ENST00000459584 64 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 RN7SL432P-201ENST00000484057 298 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC090096.1-201ENST00000489168 390 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 NDUFB4P2-201ENST00000509515 391 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.45□□□□□ -2.02
LCMT2O60294 RNU2-10P-201ENST00000516375 211 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 Y_RNA.695-201ENST00000516715 107 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 CKS1BP7-201ENST00000522230 235 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC022616.3-201ENST00000523940 148 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.45□□□□□ -2.02
LCMT2O60294 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.45□□□□□ -2.02
LCMT2O60294 AL359212.1-201ENST00000556608 614 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.45□□□□□ -2.02
LCMT2O60294 AC005771.1-201ENST00000585581 349 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC119751.7-201ENST00000600494 245 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 RPL12P50-201ENST00000603116 116 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 SEPT7P9-203ENST00000604116 343 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 MIR6852-201ENST00000621699 66 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 AC092608.2-201ENST00000624427 218 ntBASIC2.45□□□□□ -2.02
LCMT2O60294 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LCMT2O60294 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LCMT2O60294 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LCMT2O60294 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 RNU6-288P-201ENST00000363690 104 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 RNU4-91P-201ENST00000364778 135 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 SNORD116-1-201ENST00000384335 95 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 Y_RNA.510-201ENST00000384511 114 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AL139039.1-201ENST00000401900 692 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.44□□□□□ -2.02
LCMT2O60294 AC009961.2-201ENST00000435771 251 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 USP9YP15-201ENST00000442391 422 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.44□□□□□ -2.02
LCMT2O60294 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.44□□□□□ -2.02
LCMT2O60294 SNRPFP4-201ENST00000456366 242 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 SNORD97-201ENST00000459187 142 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 SRIP1-201ENST00000489235 288 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC008716.1-201ENST00000511084 513 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 RNU6-1092P-201ENST00000516955 87 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 SCARNA11.3-201ENST00000517276 130 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 HMGB1P41-201ENST00000520234 440 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.44□□□□□ -2.02
LCMT2O60294 MIR3167-201ENST00000579623 85 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC073544.2-201ENST00000601155 540 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.44□□□□□ -2.02
LCMT2O60294 AC108479.2-201ENST00000617314 601 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC010297.1-201ENST00000623948 149 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AC110994.2-201ENST00000635481 492 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 TEX21P-201ENST00000447107 1476 ntBASIC2.44□□□□□ -2.02
LCMT2O60294 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.44□□□□□ -2.02
LCMT2O60294 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.44□□□□□ -2.02
LCMT2O60294 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
LCMT2O60294 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.43□□□□□ -2.02
LCMT2O60294 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
LCMT2O60294 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 RNU6-1072P-201ENST00000384703 107 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 RNU6-443P-201ENST00000384780 107 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 MIR592-201ENST00000384959 97 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LCMT2O60294 ELOCP4-201ENST00000420090 333 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 BPY2DP-201ENST00000422208 265 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 ISCA1P1-201ENST00000426679 387 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 AC104651.1-201ENST00000427559 735 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.43□□□□□ -2.02
LCMT2O60294 ISCA1P6-201ENST00000427740 390 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.43□□□□□ -2.02
LCMT2O60294 MTCO2P16-201ENST00000436962 677 ntBASIC2.43□□□□□ -2.02
LCMT2O60294 MTND2P22-201ENST00000444325 1033 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms