Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-953P-201ENST00000459154 107 ntBASIC2.9□□□□□ -1.95
PRKNO60260 RPL21P8-201ENST00000465083 535 ntBASIC2.9□□□□□ -1.95
PRKNO60260 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 AC098591.2-201ENST00000510152 315 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AC008885.1-201ENST00000514930 301 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 RNU6-927P-201ENST00000516199 100 ntBASIC2.9□□□□□ -1.95
PRKNO60260 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.9□□□□□ -1.95
PRKNO60260 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 AL138976.2-201ENST00000563989 694 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.9□□□□□ -1.95
PRKNO60260 AC005730.3-201ENST00000583067 366 ntBASIC2.9□□□□□ -1.95
PRKNO60260 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.9□□□□□ -1.95
PRKNO60260 AC022893.3-201ENST00000607665 437 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AL008636.1-201ENST00000625038 1018 ntBASIC2.9□□□□□ -1.95
PRKNO60260 SNORA50A-202ENST00000629536 136 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PRKNO60260 MTND5P42-201ENST00000637720 498 ntBASIC2.9□□□□□ -1.95
PRKNO60260 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKNO60260 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRKNO60260 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.9□□□□□ -1.95
PRKNO60260 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKNO60260 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKNO60260 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKNO60260 MTND4P14-201ENST00000435799 1354 ntBASIC2.89□□□□□ -1.95
PRKNO60260 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PRKNO60260 AL353743.1-202ENST00000431724 1695 ntBASIC2.89□□□□□ -1.95
PRKNO60260 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKNO60260 RNU4-66P-201ENST00000365199 138 ntBASIC2.89□□□□□ -1.95
PRKNO60260 RNU4-20P-201ENST00000365601 151 ntBASIC2.89□□□□□ -1.95
PRKNO60260 DEFB109C-201ENST00000382575 264 ntBASIC2.89□□□□□ -1.95
PRKNO60260 DEFB109B-201ENST00000382656 264 ntBASIC2.89□□□□□ -1.95
PRKNO60260 SNORA54-201ENST00000384281 123 ntBASIC2.89□□□□□ -1.95
PRKNO60260 RNU6-817P-201ENST00000391083 104 ntBASIC2.89□□□□□ -1.95
PRKNO60260 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKNO60260 CISD1P1-201ENST00000393907 327 ntBASIC2.89□□□□□ -1.95
PRKNO60260 RNU6-387P-201ENST00000411331 105 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKNO60260 OR6C66P-201ENST00000414917 930 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.89□□□□□ -1.95
PRKNO60260 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKNO60260 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.89□□□□□ -1.95
PRKNO60260 AL356867.1-201ENST00000429623 299 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKNO60260 RPL36AP53-201ENST00000432891 316 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AL591212.2-201ENST00000433923 257 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AL121601.2-201ENST00000438019 707 ntBASIC2.89□□□□□ -1.95
PRKNO60260 MTND3P16-201ENST00000452205 344 ntBASIC2.89□□□□□ -1.95
PRKNO60260 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKNO60260 AC012181.1-201ENST00000479895 423 ntBASIC2.89□□□□□ -1.95
PRKNO60260 RPL38P4-201ENST00000502376 214 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC098799.2-201ENST00000509466 868 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKNO60260 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKNO60260 RNA5SP341-201ENST00000516261 117 ntBASIC2.89□□□□□ -1.95
PRKNO60260 SNORA64.4-201ENST00000516632 81 ntBASIC2.89□□□□□ -1.95
PRKNO60260 RNA5SP471-201ENST00000516971 106 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC009812.2-201ENST00000517657 457 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC093331.1-201ENST00000521474 169 ntBASIC2.89□□□□□ -1.95
PRKNO60260 PSMA2P1-201ENST00000526365 646 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKNO60260 MIR5583-1-201ENST00000580941 59 ntBASIC2.89□□□□□ -1.95
PRKNO60260 BNIP3P10-201ENST00000605360 577 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC005000.2-201ENST00000605468 310 ntBASIC2.89□□□□□ -1.95
PRKNO60260 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKNO60260 AL359547.2-201ENST00000615810 418 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC090132.2-201ENST00000615881 347 ntBASIC2.89□□□□□ -1.95
PRKNO60260 uc_338.11-201ENST00000619132 160 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC006504.8-201ENST00000621046 635 ntBASIC2.89□□□□□ -1.95
PRKNO60260 AC100810.6-201ENST00000638068 285 ntBASIC2.89□□□□□ -1.95
PRKNO60260 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKNO60260 ZNF826P-207ENST00000622273 1910 ntBASIC2.89□□□□□ -1.95
PRKNO60260 TPTE2P4-201ENST00000258589 1605 ntBASIC2.89□□□□□ -1.95
PRKNO60260 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKNO60260 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKNO60260 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRKNO60260 SNORD56.3-201ENST00000363507 71 ntBASIC2.88□□□□□ -1.95
PRKNO60260 MIR493-201ENST00000385254 89 ntBASIC2.88□□□□□ -1.95
PRKNO60260 SNORA48.5-201ENST00000391143 135 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RNU6-332P-201ENST00000391193 108 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AL139039.1-201ENST00000401900 692 ntBASIC2.88□□□□□ -1.95
PRKNO60260 MIR1290-201ENST00000408735 78 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RNA5SP118-201ENST00000410385 109 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RNU6-193P-201ENST00000410977 107 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RNU6-373P-201ENST00000411247 98 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RPS12P24-201ENST00000412619 387 ntBASIC2.88□□□□□ -1.95
PRKNO60260 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.88□□□□□ -1.95
PRKNO60260 CALM2P2-201ENST00000428512 440 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AC007919.1-201ENST00000429380 217 ntBASIC2.88□□□□□ -1.95
PRKNO60260 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.88□□□□□ -1.95
PRKNO60260 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.88□□□□□ -1.95
PRKNO60260 RNU7-180P-201ENST00000459240 63 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RPL7P5-201ENST00000471472 736 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RPL21P99-201ENST00000480369 423 ntBASIC2.88□□□□□ -1.95
PRKNO60260 TTC39CP1-201ENST00000512513 755 ntBASIC2.88□□□□□ -1.95
PRKNO60260 SNORA20.3-201ENST00000516880 132 ntBASIC2.88□□□□□ -1.95
PRKNO60260 RNU6-685P-201ENST00000517088 95 ntBASIC2.88□□□□□ -1.95
PRKNO60260 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.88□□□□□ -1.95
PRKNO60260 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms