Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC009237.15-201ENST00000610252 501 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC008759.3-201ENST00000613300 508 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC120349.2-201ENST00000625002 298 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMGB3O15347 RNU6-1167P-201ENST00000363227 94 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 RNU6-343P-201ENST00000364709 104 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGB3O15347 U6.112-201ENST00000384129 70 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 RNU1-57P-201ENST00000384491 166 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL139397.2-201ENST00000404529 772 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 MIR1302-8-201ENST00000408342 128 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 UBE2FP1-201ENST00000416536 447 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 BTF3L4P3-201ENST00000418879 476 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 BX119904.4-201ENST00000424402 301 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL445669.1-201ENST00000426743 755 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 VN1R108P-201ENST00000431580 830 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGB3O15347 AC112771.1-201ENST00000463581 102 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AC011005.2-201ENST00000487324 359 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AC104564.1-201ENST00000493028 407 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGB3O15347 AC008549.1-201ENST00000512900 643 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 RNU6-1102P-201ENST00000516149 96 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 CYCSP27-201ENST00000527643 293 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGB3O15347 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.18□□□□□ -2.22
HMGB3O15347 SNORD53B-201ENST00000577887 78 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMGB3O15347 AP001542.2-201ENST00000593141 364 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AC073544.2-201ENST00000601155 540 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGB3O15347 AC010900.2-201ENST00000604508 210 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL161798.1-201ENST00000604630 131 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 U1.36-201ENST00000620684 176 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL445264.1-201ENST00000621719 171 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AL157770.1-201ENST00000623049 439 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 AP000776.1-201ENST00000530032 1663 ntBASIC1.18□□□□□ -2.22
HMGB3O15347 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMGB3O15347 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 RNU5E-1-201ENST00000362477 120 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 RNU6-223P-201ENST00000362830 107 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 MIR583-201ENST00000384846 75 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 MIR483-201ENST00000385070 76 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HMGB3O15347 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HMGB3O15347 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 ISCA1P1-201ENST00000426679 387 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 MTCYBP15-201ENST00000433123 1127 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 COX7BP2-201ENST00000437976 242 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 RPS15AP9-201ENST00000439856 381 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AC020550.1-201ENST00000447385 163 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGB3O15347 AC092001.1-201ENST00000453012 261 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 FABP5P15-201ENST00000453566 214 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGB3O15347 RNU6-678P-201ENST00000516832 109 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 SNORA31.24-201ENST00000517232 57 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGB3O15347 AC087276.1-201ENST00000529659 480 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 ARL2BPP2-201ENST00000550907 489 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB3O15347 AC090330.1-201ENST00000588646 764 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 OR4H6P-202ENST00000603819 340 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AC099842.1-201ENST00000619919 596 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AC064859.1-201ENST00000624741 174 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB3O15347 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.17□□□□□ -2.22
HMGB3O15347 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB3O15347 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGB3O15347 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HMGB3O15347 MIR16-2-201ENST00000362117 81 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMGB3O15347 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 BTF3L4P2-201ENST00000392798 346 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 RNU2-48P-201ENST00000410694 191 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 USP9YP26-201ENST00000421008 661 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 C1DP1-201ENST00000426049 402 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 SEPT14P24-201ENST00000447236 180 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGB3O15347 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGB3O15347 RNA5SP57-201ENST00000459463 123 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 AL049873.1-201ENST00000480540 376 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGB3O15347 AC110760.3-202ENST00000515177 371 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 RNU6-250P-201ENST00000516958 103 ntBASIC1.16□□□□□ -2.22
HMGB3O15347 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.16□□□□□ -2.22
HMGB3O15347 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms