Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP1O15259 AC137800.2-201ENST00000574375 120 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP1O15259 NRBF2P1-201ENST00000587407 859 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 MIR15A-201ENST00000607334 83 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC087241.4-201ENST00000612441 480 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NPHP1O15259 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP1O15259 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP1O15259 TEX21P-201ENST00000447107 1476 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AL512633.1-201ENST00000399931 655 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 MTND3P17-201ENST00000416968 344 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 RPL36AP6-201ENST00000435770 321 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AL590639.1-201ENST00000456484 337 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP1O15259 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP1O15259 AC096725.1-201ENST00000514266 313 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 SCARNA24.1-201ENST00000516465 137 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 Y_RNA.688-201ENST00000516565 95 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AC090572.1-201ENST00000519251 160 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AP002770.2-201ENST00000543613 532 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP1O15259 AC021739.1-201ENST00000559631 174 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP1O15259 AC110760.3-201ENST00000598794 467 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AC064872.1-201ENST00000604823 1072 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 MIR6817-201ENST00000615588 66 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 Z69908.1-201ENST00000622603 247 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 MIR3199-2-201ENST00000636243 86 ntBASIC3.49□□□□□ -1.85
NPHP1O15259 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP1O15259 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NPHP1O15259 AC108206.1-201ENST00000570186 4159 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC010889.1-201ENST00000566193 2666 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NPHP1O15259 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
NPHP1O15259 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHP1O15259 SNORA68.1-201ENST00000364537 132 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AL513475.1-201ENST00000406602 315 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 RN7SKP58-201ENST00000411010 305 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC080125.1-201ENST00000414888 684 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP1O15259 AL353706.1-201ENST00000436728 494 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AL031667.1-201ENST00000440222 725 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 UQCRHP3-201ENST00000451503 251 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP1O15259 FABP5P13-201ENST00000452144 328 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 TRBV1-201ENST00000476502 284 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 RPS15AP34-201ENST00000487776 387 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC117522.1-201ENST00000509821 380 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP1O15259 RNA5SP385-201ENST00000515947 110 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 Y_RNA.695-201ENST00000516715 107 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 SNORA18.6-201ENST00000516792 115 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 RNU6-1183P-201ENST00000517054 60 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHP1O15259 HPRT1P3-201ENST00000539521 576 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP1O15259 AC024619.4-201ENST00000580924 316 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC073544.2-201ENST00000601155 540 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC019159.1-201ENST00000605094 187 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 AC243829.7-201ENST00000633081 225 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NPHP1O15259 ELL2P3-201ENST00000457883 1602 ntBASIC3.48□□□□□ -1.85
NPHP1O15259 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP1O15259 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP1O15259 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP1O15259 AC103710.2-202ENST00000641454 2853 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 U3.12-201ENST00000364498 214 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP1O15259 RNU6-641P-201ENST00000384006 107 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 SNORA24.1-201ENST00000384401 135 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NPHP1O15259 RNA5SP21-201ENST00000410917 96 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP1O15259 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP1O15259 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP1O15259 UBBP3-201ENST00000445497 241 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP1O15259 AC117522.3-201ENST00000507974 584 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP1O15259 AC108078.2-201ENST00000510750 236 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 AC025755.1-201ENST00000521306 278 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP1O15259 AC006199.1-201ENST00000548728 219 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 AC087883.1-201ENST00000551882 391 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP1O15259 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP1O15259 AL359547.2-201ENST00000615810 418 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 CU459211.1-201ENST00000635667 749 ntBASIC3.47□□□□□ -1.85
NPHP1O15259 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP1O15259 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
NPHP1O15259 RNA5SP68-201ENST00000363885 119 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 RN7SKP226-201ENST00000364912 300 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 SNORA70B-201ENST00000384210 135 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 MIR512-1-201ENST00000384913 84 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AL121890.1-201ENST00000435457 205 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AC009961.3-201ENST00000449832 765 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHP1O15259 SCARNA17.1-201ENST00000516211 143 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms