Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AL031779.1-201ENST00000415663 330 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD9O15198 MTCYBP8-201ENST00000422855 651 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SMAD9O15198 MTCYBP5-201ENST00000423752 1135 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD9O15198 AC005300.1-201ENST00000428401 373 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.96□□□□□ -1.94
SMAD9O15198 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.96□□□□□ -1.94
SMAD9O15198 AL118520.1-201ENST00000450770 291 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 GMFBP1-201ENST00000467831 427 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 RPS29P20-201ENST00000489592 171 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD9O15198 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD9O15198 RNU1-103P-201ENST00000516502 125 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 Y_RNA.693-201ENST00000516641 110 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 Y_RNA.704-201ENST00000516851 102 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 SNORA31.26-201ENST00000517250 137 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.96□□□□□ -1.94
SMAD9O15198 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD9O15198 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMAD9O15198 H3F3AP1-201ENST00000559984 334 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 HMGB1P33-201ENST00000563485 527 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 TPRKBP2-201ENST00000565969 475 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.96□□□□□ -1.94
SMAD9O15198 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.96□□□□□ -1.94
SMAD9O15198 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.96□□□□□ -1.94
SMAD9O15198 AL162713.1-201ENST00000604480 262 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.96□□□□□ -1.94
SMAD9O15198 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMAD9O15198 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SMAD9O15198 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SMAD9O15198 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMAD9O15198 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMAD9O15198 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 RNU6-395P-201ENST00000365662 106 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 RNU6-517P-201ENST00000384362 110 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 Y_RNA.554-201ENST00000384672 102 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD9O15198 RNU2-29P-201ENST00000410423 189 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 RNU4-46P-201ENST00000410818 138 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.95□□□□□ -1.94
SMAD9O15198 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.95□□□□□ -1.94
SMAD9O15198 ZNF885P-201ENST00000420174 1098 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 C8orf59P1-201ENST00000429930 303 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC104332.2-201ENST00000429959 156 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD9O15198 RPL37P4-201ENST00000448908 268 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD9O15198 AC083798.1-201ENST00000472671 131 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 TRBV1-201ENST00000476502 284 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AL163973.1-201ENST00000484753 577 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD9O15198 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD9O15198 SNORA40.12-201ENST00000516329 111 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 RN7SKP219-201ENST00000516825 296 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 SNORA31.21-201ENST00000517180 77 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.95□□□□□ -1.94
SMAD9O15198 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD9O15198 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.95□□□□□ -1.94
SMAD9O15198 AP003033.1-201ENST00000527244 415 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.95□□□□□ -1.94
SMAD9O15198 AC025678.1-201ENST00000567861 338 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD9O15198 HMGN2P15-201ENST00000585707 270 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 AL355598.1-201ENST00000604169 202 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 U4.5-201ENST00000617137 123 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 SCARNA15.3-201ENST00000626315 122 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 SCARNA4.1-201ENST00000628597 123 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 U6.99-201ENST00000637524 83 ntBASIC2.95□□□□□ -1.94
SMAD9O15198 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMAD9O15198 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.95□□□□□ -1.94
SMAD9O15198 AC006020.1-201ENST00000420179 1854 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD9O15198 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD9O15198 AP003122.5-201ENST00000527668 3766 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD9O15198 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD9O15198 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD9O15198 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMAD9O15198 RNU1-75P-201ENST00000347264 129 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 Y_RNA.255-201ENST00000364581 97 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD9O15198 RNU1-73P-201ENST00000383971 164 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 RPL5P18-201ENST00000406671 891 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 Y_RNA.599-201ENST00000410489 109 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 FCF1P9-201ENST00000412546 282 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 RPL26P27-201ENST00000414397 437 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.94□□□□□ -1.94
SMAD9O15198 AL353729.1-201ENST00000425044 720 ntBASIC2.94□□□□□ -1.94
SMAD9O15198 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms