Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SOX1O00570 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX1O00570 AL133243.3-201ENST00000617415 3004 ntBASIC4.67□□□□□ -1.66
SOX1O00570 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SOX1O00570 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX1O00570 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX1O00570 RNU5A-1-201ENST00000362698 116 ntBASIC4.67□□□□□ -1.66
SOX1O00570 Y_RNA.54-201ENST00000362766 105 ntBASIC4.67□□□□□ -1.66
SOX1O00570 SNORD50.1-201ENST00000362987 71 ntBASIC4.67□□□□□ -1.66
SOX1O00570 MIR3065-201ENST00000390137 79 ntBASIC4.67□□□□□ -1.66
SOX1O00570 AL592148.1-201ENST00000413568 445 ntBASIC4.67□□□□□ -1.66
SOX1O00570 AC115115.1-201ENST00000449927 248 ntBASIC4.67□□□□□ -1.66
SOX1O00570 RPS26P28-201ENST00000470806 348 ntBASIC4.67□□□□□ -1.66
SOX1O00570 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.67□□□□□ -1.66
SOX1O00570 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX1O00570 AC120057.2-201ENST00000571520 271 ntBASIC4.67□□□□□ -1.66
SOX1O00570 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.67□□□□□ -1.66
SOX1O00570 AL161798.1-201ENST00000604630 131 ntBASIC4.67□□□□□ -1.66
SOX1O00570 AC009318.2-201ENST00000610917 651 ntBASIC4.67□□□□□ -1.66
SOX1O00570 MIR3651-201ENST00000630427 90 ntBASIC4.67□□□□□ -1.66
SOX1O00570 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
SOX1O00570 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX1O00570 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX1O00570 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX1O00570 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX1O00570 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 ADAM5-202ENST00000399789 1942 ntBASIC4.66□□□□□ -1.66
SOX1O00570 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX1O00570 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX1O00570 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX1O00570 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 LINC02555-201ENST00000563933 1951 ntBASIC4.66□□□□□ -1.66
SOX1O00570 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 RNU1-14P-201ENST00000362759 152 ntBASIC4.66□□□□□ -1.66
SOX1O00570 MIR190B-201ENST00000401119 79 ntBASIC4.66□□□□□ -1.66
SOX1O00570 LAP3P1-201ENST00000403648 294 ntBASIC4.66□□□□□ -1.66
SOX1O00570 MRPL35P1-201ENST00000404272 572 ntBASIC4.66□□□□□ -1.66
SOX1O00570 RNA5SP296-201ENST00000410523 111 ntBASIC4.66□□□□□ -1.66
SOX1O00570 COX5BP7-201ENST00000414780 274 ntBASIC4.66□□□□□ -1.66
SOX1O00570 MTCO1P39-201ENST00000426148 480 ntBASIC4.66□□□□□ -1.66
SOX1O00570 AL445433.1-201ENST00000457507 257 ntBASIC4.66□□□□□ -1.66
SOX1O00570 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX1O00570 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX1O00570 AC084851.1-201ENST00000529105 249 ntBASIC4.66□□□□□ -1.66
SOX1O00570 AC093023.1-201ENST00000547375 507 ntBASIC4.66□□□□□ -1.66
SOX1O00570 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX1O00570 MIR376A1-201ENST00000616574 68 ntBASIC4.66□□□□□ -1.66
SOX1O00570 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 AC090971.4-201ENST00000560291 1800 ntBASIC4.66□□□□□ -1.66
SOX1O00570 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX1O00570 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX1O00570 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.66□□□□□ -1.66
SOX1O00570 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SOX1O00570 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SOX1O00570 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.65□□□□□ -1.66
SOX1O00570 NCAPGP1-201ENST00000505112 1814 ntBASIC4.65□□□□□ -1.66
SOX1O00570 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX1O00570 Y_RNA.200-201ENST00000364018 102 ntBASIC4.65□□□□□ -1.67
SOX1O00570 Y_RNA.277-201ENST00000364754 102 ntBASIC4.65□□□□□ -1.67
SOX1O00570 RNU6-662P-201ENST00000384253 104 ntBASIC4.65□□□□□ -1.67
SOX1O00570 Y_RNA.464-201ENST00000384282 110 ntBASIC4.65□□□□□ -1.67
SOX1O00570 U8.11-201ENST00000384699 133 ntBASIC4.65□□□□□ -1.67
SOX1O00570 U8.12-201ENST00000384701 133 ntBASIC4.65□□□□□ -1.67
SOX1O00570 RPS29P13-201ENST00000402041 169 ntBASIC4.65□□□□□ -1.67
SOX1O00570 AL139156.1-201ENST00000412785 841 ntBASIC4.65□□□□□ -1.67
SOX1O00570 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX1O00570 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SOX1O00570 AL451050.1-201ENST00000450126 415 ntBASIC4.65□□□□□ -1.67
SOX1O00570 U8.18-201ENST00000459285 133 ntBASIC4.65□□□□□ -1.67
SOX1O00570 RPL23AP45-201ENST00000476406 468 ntBASIC4.65□□□□□ -1.67
SOX1O00570 AC010469.2-201ENST00000496412 480 ntBASIC4.65□□□□□ -1.67
SOX1O00570 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX1O00570 RNU6-1338P-201ENST00000516328 91 ntBASIC4.65□□□□□ -1.67
SOX1O00570 MIR2355-201ENST00000517199 87 ntBASIC4.65□□□□□ -1.67
SOX1O00570 AC109479.2-201ENST00000517842 174 ntBASIC4.65□□□□□ -1.67
SOX1O00570 IGKV2D-19-201ENST00000523346 262 ntBASIC4.65□□□□□ -1.67
SOX1O00570 MIR7975-201ENST00000619350 68 ntBASIC4.65□□□□□ -1.67
SOX1O00570 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX1O00570 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX1O00570 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX1O00570 HSPA8P1-201ENST00000425843 1833 ntBASIC4.65□□□□□ -1.67
SOX1O00570 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX1O00570 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SOX1O00570 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX1O00570 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX1O00570 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SOX1O00570 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SOX1O00570 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms